Astyanax mexicanus (Mexican tetra): 125797530
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Entry
125797530 CDS
T05042
Name
(RefSeq) jmjC domain-containing protein 8-like
KO
K25792
jumonji domain-containing protein 8
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amex03400
]
125797530
DNA repair and recombination proteins [BR:
amex03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
125797530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cupin_8
JmjC_2
JmjC
Cupin_1
Motif
Other DBs
NCBI-GeneID:
125797530
NCBI-ProteinID:
XP_049329880
LinkDB
All DBs
Position
Unknown
AA seq
260 aa
AA seq
DB search
MAWFRRCVVLLLLVQWVKQEDTGGWGRESSLNDEGECNIEVRDVNSITHTEFIREYAYTK
PVILRGVTDNTKFRLLCSKDNLLREYSKKTVRLSTANTHSYRKVDVRFEEFVKVLLTPQS
EDTLGSDTLYFFGDNNFTEWNSLFEEYKAPPYGLPYTSPAYSFGIAGPGTGVPFHWHGPG
YSEVIYGRKRWFLYPPDHSPEFHPNYTTLSWLTQSYPLLETHNKPLECTIRPGEVLYFPD
RWWHATLNLDTSVFISTFLG
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atggcctggttcagaaggtgtgtggtgctgctgctgcttgtccagtgggtgaagcaggaa
gatactggaggctggggtcgggagtccagtctgaatgatgaaggtgaatgcaacattgaa
gttcgggatgtgaattcaatcacacacacagagtttatacgggaatacgcatacactaag
cctgtgatactgagaggagtcactgataacacgaaattcagattactgtgttccaaggac
aatttgctgcgagagtacagtaaaaaaacagtccgactgagtactgctaacacacactcc
tacagaaaagtggacgtgcggtttgaggagtttgtgaaagtcctgttgacccctcagtct
gaagatacgctgggcagcgatacgctgtatttctttggtgataataactttactgagtgg
aattcactgtttgaggagtataaagcgccaccttacggattaccttacactagccctgcc
tacagctttggaattgcaggtccaggtacaggagtgccgttccactggcacggtcctggc
tactctgaggtcatctacggtagaaagcgttggtttctgtatcctcctgatcattctcct
gaattccacccaaactacaccaccctgtcctggcttacacagtcctaccccctcctggag
acacacaacaaaccactggagtgtaccatcagaccaggagaggtgctgtattttccggac
cgttggtggcacgctacactaaacctggacacaagtgttttcatctccaccttcctggga
taa
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