Astyanax mexicanus (Mexican tetra): 125801142
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Entry
125801142 CDS
T05042
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
125801142
04121 Ubiquitin system [BR:
amex04121
]
125801142
Transcription factors [BR:
amex03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
125801142
Ubiquitin system [BR:
amex04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
125801142
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
DUF659
Motif
Other DBs
NCBI-GeneID:
125801142
NCBI-ProteinID:
XP_049333290
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All DBs
Position
4:complement(22988984..22991561)
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AA seq
578 aa
AA seq
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MCFINQSDLTFCFALSINSTKQRRVDDFFQRRGLCTPQMTEVLTGSILDMFLKDMRPISM
VGDEGFKQMIHTFHPGYTLPSRTHFTKLMEAKYEATLGKVKESLKSTKNKISLTADAWTS
VATEAYLGITCHFISDEWELNSFCLTTLPLEERHTGSNIAAWIEQTVEMFEIPPKKIMAL
VHDNGSNMVLAANILQEKHGWISVHCAGHTLQLIVNNALKHPQISKALGASRCLVEHFKR
SELASSKLKAKQKQMGTPEHKLVQDISTRWNSTYYMMNRLLEQRWPLTATLSDPAVTQRG
KHFLDLKSDQWTLIEELEKALQAFECATVYLSGESYVTVSALPPLVKGLLNSTHTVYDTT
PVQAFQKAASEEISARWSKLVTVTDDNPSKLIIAAALDPRFRKSKFLPPEERFIMQSKVQ
ALALQCMDGSSIVTNQSTNRMEEAAAPPDGHATGSPKKSPSRSVSAIESLLGCDSTDSDS
EINENDVQHQVITNEVLAYFGEQPISKKENPLSWWKLNEPKYPTLASMAKSFLCIPATST
PSERLFSASGNIASKKRASLSPEHVNMLTFLHCNLKLL
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgtgctttataaatcaatctgacttgactttctgttttgctctttctattaatagcact
aagcagaggcgtgtggatgactttttccagagaagaggcttatgcacccctcagatgact
gaggtcttgacagggagcatcctcgacatgtttctcaaagacatgagaccaatttctatg
gttggagatgaaggcttcaagcagatgatacacacattccacccaggttacaccttacct
tccagaactcactttaccaagctcatggaggcaaagtatgaagctactcttggtaaggtt
aaagaatctcttaaatcaaccaagaacaagatttccctgacagctgatgcctggaccagt
gttgctacagaggcatatcttggcatcacttgtcactttataagtgatgagtgggagctc
aatagcttttgtctcacaacattgccactagaagaacgacacactggatcgaacattgct
gcatggattgagcaaactgtggaaatgtttgagatccctccaaaaaagatcatggcactt
gtccacgacaatggctccaatatggttctggcagcaaacattttgcaggaaaaacatgga
tggatatctgttcactgtgctggacacactttgcaattgattgtcaacaatgcactgaaa
caccctcagatcagtaaagcactgggagcatcaaggtgcctcgtggagcactttaaacga
agtgaactggcttcaagcaagcttaaagccaagcaaaaacagatggggaccccagaacac
aaacttgtccaggacatctctaccaggtggaatagcacctattatatgatgaatcgcctg
ctggaacagagatggccactgactgcaactctgtctgatccagctgtaacacaaagaggg
aaacatttcctagacctcaaatctgatcagtggacactgattgaagaactggaaaaagct
ctacaggcttttgaatgtgccactgtctacctgagtggtgaaagctatgtgacagtctct
gccctgcctcctctggtcaaaggtcttttgaactccacccacactgtctatgatacgact
ccagtgcaggccttccagaaagctgcttcagaagagatcagtgcacgctggtcaaaattg
gtcacggtcactgatgataacccaagtaaactgattatagcagctgcactagatccacgt
tttcgaaaatctaaattcctgccaccagaggagaggtttattatgcagagtaaagttcaa
gctctggccttacagtgcatggatgggagcagcatcgtaacaaaccagagcaccaatagg
atggaagaagccgcagcaccaccagatgggcatgccacaggctcacctaagaaaagtcca
agtaggtctgtttcagctatcgaatcactgcttggatgtgactcaacagacagtgacagt
gaaatcaatgaaaatgatgtgcaacaccaagtgataactaatgaagtgcttgcgtacttt
ggagagcagcccatctcaaagaaagaaaatcccctgtcttggtggaagctgaatgagcca
aagtatccaactcttgcatcaatggccaaatcattcttgtgtattcctgctacttccact
ccctctgagcgcctcttctcagcatcgggtaacattgcctcaaagaagagagccagtctt
tctccagagcatgttaatatgctcacgttcttgcactgcaatttaaagcttttataa
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