Astyanax mexicanus (Mexican tetra): 125801481
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Entry
125801481 CDS
T05042
Name
(RefSeq) gastrula zinc finger protein XlCGF49.1-like
KO
K09191
general transcription factor IIIA
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
125801481
03021 Transcription machinery [BR:
amex03021
]
125801481
Transcription factors [BR:
amex03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
125801481
Transcription machinery [BR:
amex03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIA
125801481
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_16
zf-C2H2_4
zf-C2H2_15
Zn_ribbon_8
C2CH-3rd_BIRD-IDD
zf-C2H2_11
zf-C2H2_ZN142
zf-LYAR
Phage_zn_bind_3
DUF7129
Zn_ribbon_SprT
zf_Tbcl_Rhp7
zf-met
zf_UBZ
zf-C2H2_DHX34
DUF7128
Zap1_zf1
zf_C2H2_ZHX
zf-C2HE
zf-C2H2_jaz
zf-C2H2_6
HalOD2
Motif
Other DBs
NCBI-GeneID:
125801481
NCBI-ProteinID:
XP_049334220
LinkDB
All DBs
Position
4:15618081..15632654
Genome browser
AA seq
256 aa
AA seq
DB search
MKPSPDMEKHQNSVKSFTKQSNLKIHQRIHTGDKPYHCLDCGKSFNRPGTLKLHQRIHTG
EKPYHCSDCGSSFTQQIHLKRHQLIHTGEKPYHCSDCGKSFTKQSHFKIHQRIHTGEKPY
HCTDCGKSFTTQSDLKKHQRIHTGEKPYHCSNCGKRFTEHNKLKIHQRIHTGEKPYHCTD
CGKSFTEHSKLKIHQRIHTGEKPYHCTDCGKRFTEQSNLKKHQRIHTGEKPYHCSDCGKS
FTEHSKLKKHQRIHTG
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgaagccaagtcccgacatggagaaacatcagaactctgtcaagagttttactaaacag
agtaatctcaaaatacaccagcgcattcacacaggagacaaaccgtatcactgcttagac
tgtgggaagagttttaatagaccggggactctaaaactgcatcagcgcattcacacagga
gagaaaccttatcactgctcagactgtggaagtagttttactcaacagattcatctaaaa
cgacaccagctcattcacacaggagaaaaaccgtatcactgctcagactgtggaaagagt
tttactaaacagagtcatttcaaaatacaccagcgcattcatactggagagaaaccgtat
cactgcacagactgtgggaagagttttactacacagagtgatctcaaaaaacaccagcgc
attcacacaggagagaaaccgtatcactgctcaaactgtgggaagagatttactgaacac
aataaactcaaaatacaccagcgcattcacacaggagagaaaccgtatcactgcacagac
tgcgggaagagttttactgaacacagtaaactcaaaatacaccagcgcattcacacagga
gagaaaccgtatcactgcacagactgtgggaagagatttactgaacagagtaatctcaaa
aaacaccagcgcattcacacaggagagaaaccgtatcactgctcagactgcgggaagagt
tttactgaacacagtaaactaaaaaaacaccagcgcattcacacaggatag
DBGET
integrated database retrieval system
