Astyanax mexicanus (Mexican tetra): 125802991
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Entry
125802991 CDS
T05042
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
125802991
04121 Ubiquitin system [BR:
amex04121
]
125802991
Transcription factors [BR:
amex03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
125802991
Ubiquitin system [BR:
amex04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
125802991
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-BED
hAT-like_RNase-H
DBD_Tnp_Hermes
DUF7060
Motif
Other DBs
NCBI-GeneID:
125802991
NCBI-ProteinID:
XP_049337568
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Position
7:complement(31420798..31425124)
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AA seq
573 aa
AA seq
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MASRENPESESEEEGEPSALDDIVPKKGRTTSNIWKWFGYLKSDQAQLSPKCRICRRAVQ
TKTGNTTNLFHHLKKYHPVEYTESVNIRSGAASQPLSHGTSQPSSSGVSPKQQSIVATFA
SITPYETKTKRHQEITKAVTYFMAKDMMPLSTVEKEGFKNLVKVLDSRYQLPGRKYFSQT
ALPLLYEECRAKLEAELKLVRHFATTADMWSSRTSEPYLSLTVHYIDEEWNLQNRCLQTA
FVPEDHTAEIISHALEDALASWGLREERQVCITTDNGANIAKAVSLKKWTRLQCFGHRLH
LAIERGGRDSRIQRAIGVCKKVVSAFSFSWKKQKALAAAQEELNLPKHKLVTESPTRWGS
RQKMVGRLIEQEKAIVKVLSTDKKTRHLVPTWQDVDILESVHKALSPLVSFTDALSGETY
VSVSYVKPVLHLLNEDILKPDADDSDLTKSIKTTVISYLNEKYDEAATDDLLDIASLLDP
RFKTRYVKEDKVNGIKARAMAEMLHEGLNNPEADSTLKSTEDEGGDATPAKKQKMTLGSF
FKKPHAVTTAGLTEQEAAEAELNNYLLAPDADR
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atggccagtagagagaaccccgaaagcgaaagtgaagaggagggtgagccatctgctctt
gatgacattgttccaaagaaaggacgtaccacgtccaatatatggaagtggttcggatat
cttaagtccgaccaagcgcagttaagcccaaaatgcagaatatgtcgccgtgcagtgcag
acaaaaacaggaaacactactaatttgtttcatcatttgaaaaaatatcatcctgtcgag
tacacagagagtgtaaacatacgttcaggtgccgctagccagccgctaagccatggcact
agccagccatcgagcagcggagtatctccaaaacaacaatcaattgtggcgacgtttgcc
tcaattaccccttacgaaacaaaaacgaaaaggcaccaggagattacaaaagcggtcacc
tatttcatggctaaagatatgatgccgcttagcacagtggagaaagaagggttcaagaac
ctagtgaaagtacttgactcaaggtatcaactacccggcagaaaatatttttcacagact
gcgctgccgctgctttatgaggaatgtcgagcaaaattggaagccgagttaaaacttgtg
agacactttgctactaccgctgatatgtggtcaagtcgaacatctgaaccgtaccttagc
ctcactgtgcattacatcgacgaggagtggaatttgcaaaacagatgtttgcaaacggcg
tttgtccctgaggaccacacagcagaaataatctcccacgcgctcgaggacgcactcgca
tcgtggggtctaagagaggaacgacaggtctgcatcactactgacaacggagcgaacatt
gctaaggcagtctcacttaaaaaatggactcgcctgcagtgctttggacaccggctgcac
ctagcaattgagagaggtgggagagacagcagaatacaaagagccataggtgtgtgtaag
aaggtggtcagtgccttctctttctcatggaaaaaacagaaagctctagcagctgctcaa
gaggaactcaatttgcccaagcacaaacttgtcacagaatcccctaccaggtggggatcc
cgtcagaaaatggtaggaagacttattgagcaagagaaggctattgtaaaagtcctctct
actgataagaaaacaaggcaccttgtacccacctggcaagatgtggacatcctagagtct
gtccacaaggctttgagcccgctagtgagcttcacagatgcactctctggagaaacatat
gttagtgtatcctatgtgaagcctgtgttgcacctcctcaatgaggacatcctgaagcca
gatgcagacgactcagacctcacaaagagcatcaagactacggtaatcagctatttgaat
gaaaaatatgatgaagctgcgaccgatgaccttctggacatagcatccctacttgatcct
cggttcaagacccgttacgttaaagaagacaaggttaatgggataaaagctagagccatg
gctgaaatgttacatgaaggactgaacaacccagaagctgatagcactttgaaatccaca
gaagatgaaggaggagatgctacaccagctaaaaagcagaagatgacactggggagtttt
ttcaagaagcctcatgcagtcacaacagctggccttacagaacaagaagctgctgaagct
gaattgaataactacctgttagctcctgatgctgatagatag
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