KEGG   Astyanax mexicanus (Mexican tetra): 125804802
Entry
125804802         CDS       T05042                                 
Symbol
rnf4
Name
(RefSeq) RING finger protein 4 isoform X1
  KO
K22651  E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]
Organism
amex  Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:amex00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:amex04121]
    125804802 (rnf4)
Enzymes [BR:amex01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     125804802 (rnf4)
Ubiquitin system [BR:amex04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    125804802 (rnf4)
SSDB
Motif
Pfam: zf-C3HC4_2 zf-RING_2 zf-C3HC4 zf-RING_5 zf-RING_UBOX zf-C3HC4_3 Prok-RING_4 zf-RING_4 zf-C3HC4_4 zf-rbx1 zf_RING_Vps8 zf-RING_10 zf-RING_11 IBR_1 Rad50_zn_hook zf-RING_6 zf-Nse zf-UDP
Other DBs
NCBI-GeneID: 125804802
NCBI-ProteinID: XP_049340313
LinkDB
Position
10:complement(19060186..19067510)
AA seq 216 aa
MASKQQESVVSWTCRNMHSFVSTETQLRNADSNIEVLRSVCAQRKRRSTSSCSRRNNKRT
RTQTVMETIDVLESDRLSSEEVVDLTCEASEPAVVDLTNNDSVVLVEEGTHSRRGQGTES
YVLSSDEDEEPSLNLNPAVLSSLRASSTARSTPGAVSCPVCMDAYAEIIESGRLMVSTKC
GHLFCSQCIRDSLARAHSCPTCRKKLTHKQYHPIYI
NT seq 651 nt   +upstreamnt  +downstreamnt
atggcttctaagcagcaggagtctgtggtgagctggacgtgtaggaatatgcacagcttt
gtgtcaacagaaacacagttaagaaatgctgattcaaacatcgaggtcttgaggtctgtc
tgtgctcaaagaaaaagacggtcaacttcttcatgttcaagacgcaacaacaaaaggact
aggactcagacggtcatggaaactatcgatgtgttagaaagtgacagactgagcagtgaa
gaggtagtagacttaacctgtgaagcatctgagccagctgttgtggacctcactaataat
gattctgttgtgcttgtggaagaaggcacgcatagcagacgtggacaaggcacagagagt
tacgtcttaagcagcgatgaggacgaagagccaagtctaaacctcaatccagctgtactg
tcatcacttcgagcaagcagcacagccaggtcaacaccaggagctgttagctgccctgta
tgcatggatgcctatgctgagatcatcgagagcggccggctcatggtctccaccaagtgc
ggacacctcttctgcagccagtgcattcgtgactccctggccagagctcattcctgtccc
acatgcaggaaaaagctcacacacaagcaatatcacccaatatacatctga

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