KEGG   Alteromonas macleodii English Channel 673: AMEC673_05705
Entry
AMEC673_05705     CDS       T02254                                 
Name
(GenBank) Endonuclease III/Nth
  KO
K10773  endonuclease III [EC:3.2.2.- 4.2.99.18]
Organism
amg  Alteromonas macleodii English Channel 673
Pathway
amg03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:amg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    AMEC673_05705
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:amg03400]
    AMEC673_05705
Enzymes [BR:amg01000]
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     AMEC673_05705
DNA repair and recombination proteins [BR:amg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     AMEC673_05705
 Prokaryotic type
     AMEC673_05705
SSDB
Motif
Pfam: HhH-GPD HHH
Other DBs
NCBI-ProteinID: AFT73838
UniProt: A0AB32ZW49
LinkDB
Position
complement(1338503..1339225)
AA seq 240 aa
MNDVVKPAKPLSKQEKVKEIMRILDDLYPEIPIFLDHKDPYTLLIAVLLSAQCTDERVNQ
ITPKLFARADNPYDMVLMSIEEIQDIIRPCGLSPMKSKGIWHLSDMIIKQHNGEVPANFE
ALEAMPAVGHKTAAVVMSQGFGIPAFPVDTHIHRLMYRWGLSNGKSVEQTERDAKRLFPK
ERWNDLHLQIILYGREYCPARGFDLNKCVITREFGRKSFINEVLKEQEKKQKLALKKKRK
NT seq 723 nt   +upstreamnt  +downstreamnt
atgaatgatgtagttaagccggccaagccgctttctaagcaggaaaaagtaaaagaaatc
atgcgaatactggatgacctttatccggaaattcctatctttttagatcataaagaccca
tatacgttactcattgcggttctgctatcggcgcaatgtacagacgagcgcgttaaccaa
attacgccgaagctctttgctcgggcagataatccgtacgacatggtattgatgagtatt
gaagaaattcaagacattatccgtccttgtggtttatctcccatgaagtccaaaggcatt
tggcatttgtctgacatgatcatcaagcagcacaacggtgaagtgcctgcaaactttgaa
gcgctggaagccatgcccgcagtgggtcacaagactgccgctgtggttatgtctcaaggc
tttggcattcctgcttttcccgtagatactcatatccaccgattaatgtatcgctggggt
ttgtcgaacggaaagagtgttgagcagacagagcgtgacgcaaaacgcttgttcccaaaa
gaaaggtggaacgatttgcatctgcaaatcatcctatatggcagagaatactgccctgcc
cgcggtttcgacttaaacaagtgtgttatcacacgcgagttcggcagaaagagttttatt
aacgaagtgctgaaagaacaagagaaaaagcaaaaattggcgcttaagaagaagcgtaaa
tag

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