Acropora millepora: 114953110
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Entry
114953110 CDS
T06134
Name
(RefSeq) TNF receptor-associated factor 6-like
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
amil
Acropora millepora
Pathway
amil04120
Ubiquitin mediated proteolysis
amil04140
Autophagy - animal
amil04144
Endocytosis
amil04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
amil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
114953110
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
114953110
04140 Autophagy - animal
114953110
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
114953110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amil04131
]
114953110
04121 Ubiquitin system [BR:
amil04121
]
114953110
Enzymes [BR:
amil01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114953110
Membrane trafficking [BR:
amil04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
114953110
Ubiquitin system [BR:
amil04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
114953110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_4
Sina_ZnF
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
TRAF3_RING
RING_XB3-XBAT31
zf-TRAF_2
zf-RING_6
zf-rbx1
zf-Di19
zf-RING_11
zf-DNA_Pol
Motif
Other DBs
NCBI-GeneID:
114953110
NCBI-ProteinID:
XP_044174912
LinkDB
All DBs
Position
4:20754548..20771984
Genome browser
AA seq
535 aa
AA seq
DB search
MAINEESRVWYGDSSSCFRETCTNPLSIVSLVSLTGRNEPPLTFYEKLRSEGYDEYFDPP
LENKYECSICLLGLREPMQTPCGHRFCGGCILRSIREAGSKCPVDNQHLDEWQLNPDNFA
KQEILNHPVFCRLKKAHECPWKGPLSKLEDHLKECDFVDVSCPNNCGKEFQRKDLKKHLK
DDCPNRTIPCTFCTEEVLWNSMENHFQDCPQYPLSCEKCGKENIPRIEMQDHNEKECPRA
ELKCPFSVVGCQFEGTRPAVNEHVKEKMLSHLMDLTKEFGALKIERPGLQAPKSLARRTR
GGVAAQEQASQDVLLVNLATLCQQQQTEIDGLRRVVNEMTGVVERFERRLNESRMRVETP
LQELTIRLNRQETRAFEFEGRVCNGSYIWRIENCRQRRQDALSGIATALHSPAFYTSLYG
YKLCLRINLNGVDSGVGRYIALFVHMMQGDYDSILEWPFTGRITLTILDQSEGTEFRQHI
SETLIAKPSLLAFQRPTAPRNYKGYGYVEFAPIEHIRDSQYIKNNTMLVGVQINH
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggccattaacgaagagtcgcgcgtttggtacggagacagctcttcatgttttagggaa
acatgcacaaatcctctcagtattgtcagtcttgtcagtcttactgggagaaatgaacca
ccgttgacgttttatgaaaagcttcgttctgaaggttatgacgagtatttcgatcctcct
ttggaaaacaaatatgaatgctctatctgtcttttgggtcttcgcgaaccaatgcaaaca
ccttgtggacacagattttgtggaggttgcattttgcgttcaataagggaagctggttcc
aagtgtccggtcgacaatcaacatctggatgagtggcagctcaatccagacaactttgcc
aagcaagaaatacttaatcaccctgttttttgccgtttgaagaaagcgcatgagtgccca
tggaaagggcctctaagcaagcttgaggatcacttgaaggagtgtgattttgttgatgtg
tcttgccctaataattgcggtaaggaattccaaaggaaagatctgaaaaagcatttgaag
gatgactgtccaaataggacaatcccttgcaccttctgcaccgaagaggttttgtggaat
agcatggagaatcatttccaagattgccctcaatatcctttgtcttgtgagaagtgcgga
aaagaaaacattccaagaattgagatgcaagatcacaatgagaaagagtgtccaagggcg
gagctcaagtgtcctttcagtgttgtgggctgtcaatttgagggaactcgcccagcagtg
aatgaacatgttaaagagaagatgttaagtcatttgatggacctcacaaaggaattcgga
gcattgaagattgagcggccaggcctccaagcaccaaagagtctcgctcgacgcaccagg
ggtggggtagcagcccaggagcaggcgagtcaagacgtgcttctcgtgaatttggcgaca
ttgtgtcaacaacagcaaacggaaatcgatggattgagacgcgttgttaatgaaatgaca
ggcgtggtggagcgtttcgaacgccgccttaatgaatcgcgcatgagggtggaaacgccg
ttgcaagaacttactatcaggctcaaccgtcaagaaacgagagcgtttgagttcgaaggc
cgtgtgtgcaatggctcttatatctggaggattgaaaactgccgacagcgtcgccaggac
gccctcagcggcattgcgacggccctacacagcccagccttctataccagcctctatggt
tacaagctgtgcttgcgtatcaacttgaatggcgtggacagtggagttggaagatacatt
gctctgtttgttcacatgatgcagggcgattatgatagcatccttgagtggccatttacc
ggaaggatcacccttaccatcttggaccaatccgaaggcaccgaatttcgtcagcacatc
agtgagacccttattgctaagcccagtctactggcctttcagaggccaacagctccgcgc
aactacaaggggtatggctacgtggagtttgctccgatcgagcacatccgcgattcccag
tatattaaaaacaatactatgctagtaggcgttcagattaatcattga
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