Acropora millepora: 114953111
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Entry
114953111 CDS
T06134
Name
(RefSeq) TNF receptor-associated factor 6-like
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
amil
Acropora millepora
Pathway
amil04120
Ubiquitin mediated proteolysis
amil04140
Autophagy - animal
amil04144
Endocytosis
amil04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
amil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
114953111
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
114953111
04140 Autophagy - animal
114953111
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
114953111
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amil04131
]
114953111
04121 Ubiquitin system [BR:
amil04121
]
114953111
Enzymes [BR:
amil01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114953111
Membrane trafficking [BR:
amil04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
114953111
Ubiquitin system [BR:
amil04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
114953111
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_4
zf-RING_2
zf-RING_UBOX
TRAF3_RING
Sina_ZnF
zf-C3HC4_3
zf-RING_5
TRAFD1-XIAF1_ZnF
RING_XB3-XBAT31
U-box
Motif
Other DBs
NCBI-GeneID:
114953111
NCBI-ProteinID:
XP_044174915
LinkDB
All DBs
Position
4:20529315..20561045
Genome browser
AA seq
525 aa
AA seq
DB search
MSRSFGTEDSHPWFGGTSSNPVSLFGRNEPPSRFPDNLRPEGYDEYFDPPLENKYECPIC
LLGLREPVQTICGHRFCRGCILRSIRDAGPKCPVDNVHLDEWQLHPDNFAKREMLNHLVF
CRLKKQYECPWKGPLSKLEDHLEECDFVVVSCPKNCGEEFQRIDLKKHLEDDCPNRTIPC
SFCAEEILWNSMENHFEDCPQYPLSCEKCGKENIPRIEMQDHNEKECPRAELKCPFSVVG
CQFEGTRPAVDKHVKDKMFSHLTDLTKEFRALKIEQPGYQAAKSRSRRTRGGVEAQEQAS
EGLLPNDLATLCQQQQTEIDLLRGQVNEVTALLGSVERRLNESHLRVETPLQELTIRFNR
QETKALEFEGRVCNGSYIWRIENYRQRRQDAINGVATALHSPAFYTSLYGYKLCLRINLN
GVDSGVGRYIALFVHMMQGDYDSILEWPFTGRITLTILDQSEGTEFRQHISESLIAKPNL
LAFQRPTAPRNYKGYGYVEFAPIEHIRDPQYIKNNTMLVRIQIDH
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgctcgtttggtacagaagacagccatccgtggtttggaggaacaagctcaaat
cctgttagtctttttggaagaaatgaaccaccttcaaggttccctgataatcttcgccct
gaaggttacgacgagtacttcgatcctcctttagaaaacaaatatgaatgtcctatctgt
cttttgggtcttcgcgaaccagtccaaactatttgtggacatagattttgtcgaggttgc
attttgcgttcaataagggatgctggtcccaagtgtccagttgataatgtacatctggat
gaatggcagctccatccggacaactttgccaagcgggaaatgcttaatcaccttgttttt
tgccggttgaagaaacagtatgagtgcccatggaaagggcctctaagcaagcttgaggat
cacttggaggagtgtgattttgttgttgtgtcttgccctaagaattgtggtgaggaattc
caaaggatagatctgaaaaagcatttggaggatgactgtccaaataggaccatcccttgc
tccttctgcgctgaagagattttgtggaatagcatggagaatcatttcgaagattgccct
caatatcctttgtcttgtgagaagtgcggaaaagaaaacattccaagaattgagatgcaa
gatcacaacgagaaagagtgtccaagggcggagctcaagtgtcctttcagtgttgtgggc
tgtcaatttgagggaactcgcccagccgtggataaacatgtgaaggacaagatgttcagt
catttgacagacctcacaaaggaattcagagcattgaagattgagcagccgggctatcaa
gcagcgaaaagtcgctcccgacgcaccaggggtggggtagaagcccaggagcaggctagt
gaaggtctgcttcccaatgatttggcaacattgtgtcaacaacagcaaacggaaatcgat
ctactgagaggccaggttaatgaggtgacagccttgttggggagtgtagaacgccgcctt
aatgaatcgcacttgagggtggaaacgccgttgcaagaacttactatcaggttcaaccgt
caagaaacgaaagcgttagagttcgaaggtcgtgtgtgcaatggctcttacatctggaga
attgaaaactaccgacagcgtcgccaggatgccatcaacggcgttgcgacggccctacac
agcccagccttctataccagcctctatggttacaagctgtgcttgcgtatcaacttgaat
ggcgtggacagtggagttggaagatacattgctctgtttgttcacatgatgcagggcgat
tatgatagcatccttgagtggccgtttactggaaggatcacccttacaatcttggatcaa
tccgaaggaaccgaatttcgtcagcacatcagcgagtcacttattgccaagcccaacctg
ttggcctttcagcggccaacagctccgcgcaactacaagggctatggctacgtggagttt
gctccgatcgagcacatccgcgatcctcagtacattaaaaacaataccatgctggttcgc
attcaaattgatcactga
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integrated database retrieval system
