Acropora millepora: 114953204
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Entry
114953204 CDS
T06134
Name
(RefSeq) TNF receptor-associated factor 6-like
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
amil
Acropora millepora
Pathway
amil04120
Ubiquitin mediated proteolysis
amil04140
Autophagy - animal
amil04144
Endocytosis
amil04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
amil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
114953204
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
114953204
04140 Autophagy - animal
114953204
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
114953204
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amil04131
]
114953204
04121 Ubiquitin system [BR:
amil04121
]
114953204
Enzymes [BR:
amil01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114953204
Membrane trafficking [BR:
amil04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
114953204
Ubiquitin system [BR:
amil04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
114953204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_4
zf-RING_2
zf-C3HC4_3
TRAF3_RING
Sina_ZnF
U-box
zf-TRAF_2
zf-RING_5
RING_XB3-XBAT31
TolA_bind_tri
zf-Di19
TRAFD1-XIAF1_ZnF
Prok-RING_4
zf-RING_11
SlyX
zf-RING_6
zf-C2H2
DM
Motif
Other DBs
NCBI-GeneID:
114953204
NCBI-ProteinID:
XP_044174895
LinkDB
All DBs
Position
4:20407882..20427474
Genome browser
AA seq
520 aa
AA seq
DB search
MSLSLGTEASSSGCGETSTNPVSLFGSNEPPSRFPDNIRPEGYDEYFDPPLENEYECPIC
LLGLREPVQTPCGHRFCRGCIWRSIRDAGPKCPVDNQYLDELQLTPDYFAMREMLNHAVF
CKLCPWRGPLSKLEDHSKECDFVAVSCPKNCGKEFQRKDLKKHLKDDCPNRTIPCTFCAE
EVLWNSMENHFQDCPQYPLSCEKCGKENIPRNEMQDHNEKECPTAELKCPFNVVGCPFEG
TRPAVDEHVKDKMLSHLMDLTKEFGALKIERPGLQAPKSGSRRTKGGVEAQEQASQEVPV
TNLARLCQEQQTEIDRLRGLVNEMTGTVERLERRLNDSRMKVETPLQELTIRFNRQETRG
FDFEGRVCNGSYIWRIENYRQRRQDAINGVATAVRSPAFYTSLYGYKLSLRINLNGVGRG
VGRYIALFVHMMQGDYDSILEWPFTGKITLTILDQSEGTEFRQHISESLIAKPNLLAFQR
PTAPRNYKGYGYVEFAPIEHIRDPQYIKNNTMLVRIQIDH
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgagtctttcgttgggtacagaagccagctcttctggttgtggagaaacaagcacaaat
cctgtcagtctttttgggagtaatgaaccaccttcaaggtttcctgataatattcggcct
gaaggttacgacgagtatttcgatcctcctttagaaaacgaatatgaatgccctatctgt
cttttgggtcttcgcgaaccagtgcaaactccttgtggacacagattttgtcgaggttgc
atctggcgttcaataagggatgctggtcccaagtgtccggttgataatcaatatctggat
gagttgcagctcacaccagactactttgccatgcgagaaatgcttaatcatgctgttttt
tgcaaattgtgcccatggagaggacctctaagcaagcttgaggatcactcgaaggagtgt
gattttgttgctgtgtcttgccctaagaattgcggtaaggaattccaaaggaaagatcta
aaaaagcatttgaaggatgactgtccaaataggaccatcccttgcaccttctgcgctgaa
gaggttttgtggaatagcatggagaatcatttccaagattgccctcaatatcctttgtct
tgtgagaagtgtggaaaagaaaacattccaagaaatgagatgcaagatcacaatgagaaa
gagtgtccaacggcggagctcaagtgtcctttcaatgttgtgggctgtccatttgaggga
actcgcccagcagtggatgaacatgttaaggacaagatgttaagtcatttgatggacctc
acaaaggaattcggagcattgaagattgagcggccaggcctccaagcaccgaagagtggc
tctcgacgcaccaagggtggggtagaagcccaagagcaggctagtcaagaagtgccagtc
actaatttggcaagactgtgtcaagaacagcaaacggaaatcgatagactgagaggcctt
gttaatgagatgacaggcacggtggagcgtttagaacgccgccttaatgattcgcgcatg
aaggtggaaacgccgttgcaagaacttactatcaggttcaaccgtcaagaaacgagaggg
tttgattttgagggccgtgtgtgcaatggctcatacatctggaggattgaaaactaccga
cagcgtcgccaggatgccatcaacggcgttgcgacggccgtacgcagcccagccttctat
accagcctctatggttacaagctgtccttgcgtatcaacttgaatggtgtgggcagagga
gttggaagatacattgctctgtttgttcacatgatgcagggcgattatgatagcatcctt
gagtggccatttaccgggaagatcacccttaccatcttggaccaatccgagggcaccgaa
tttcgtcagcacatcagcgagtcacttattgccaagcccaacctgttggcctttcagcgg
ccaacagctccgcgcaactacaagggctatggctacgtggagtttgctccgatcgagcac
atccgcgatcctcagtacattaaaaacaataccatgctggttcgcattcagattgatcat
tga
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