Acropora millepora: 114953216
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Entry
114953216 CDS
T06134
Name
(RefSeq) TNF receptor-associated factor 6-like
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
amil
Acropora millepora
Pathway
amil04120
Ubiquitin mediated proteolysis
amil04140
Autophagy - animal
amil04144
Endocytosis
amil04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
amil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
114953216
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
114953216
04140 Autophagy - animal
114953216
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
114953216
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amil04131
]
114953216
04121 Ubiquitin system [BR:
amil04121
]
114953216
Enzymes [BR:
amil01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114953216
Membrane trafficking [BR:
amil04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
114953216
Ubiquitin system [BR:
amil04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
114953216
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_4
Sina_ZnF
zf-RING_2
U-box
zf-RING_UBOX
zf-TRAF_2
zf-C3HC4_3
TRAF3_RING
Med9
BicD
SlyX
TolA_bind_tri
zf-DNA_Pol
TRAFD1-XIAF1_ZnF
Motif
Other DBs
NCBI-GeneID:
114953216
NCBI-ProteinID:
XP_029185245
LinkDB
All DBs
Position
4:20390894..20400782
Genome browser
AA seq
510 aa
AA seq
DB search
MSRLRESVNPVSLFGRNEPPPRFPDNLRSKGYEECFDPPLKKEHECPICLLGLREPVQAP
CGQRFCRGCIRRSLRDIGSKCPVHNDYLDELQLNPDNFAWQEVLSLSVSCQMKKMCPWKG
SLGKLQDHLKECDFVNVSCPKNCGKEIQRKDLKKHLRDDCPTIPCTFCAEEVLWNRLENH
FRDCPRYPLSCEKCGKENIPRNEMQDHNEKECPRAELKCPFNVVGCPFEGTRPAVNEHVK
EKMFSHLTDLTKEFGALKIQQSGYQAPKSRSRRTRGGVEAQEQASQEVLLSKLATLCQEQ
QTEIDGLRGRVNEMRGTVESLEGRLNESHMRVELPLQELTNRIVRQETRAFEFEGRVCNG
SYIWRIENYRQLRQDAISGIATAVHSPALYTSLYGYKLCLRINLNGVDSGVGRYIALFVH
MMQGDYDSILEWPFTGRITLTILDQSEGTEFRQHISESLIATPNLLAFQRPTAPRNYKGY
GHVEFAPIEHIRDPHYIKNNTMLVRIQIDH
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtttaagggaaagcgtaaatcctgtcagtctttttgggagaaatgaaccacct
ccaaggtttcctgataatcttcgttctaaaggttacgaagagtgtttcgatcctccttta
aaaaaggaacacgaatgccctatctgtcttttgggtcttcgcgaaccagtgcaagctcct
tgtggacagagattttgtcgaggttgtattcggcgttcattaagggatattggttccaag
tgtccggtccataatgactatctggatgagttgcagctcaatccagacaactttgcctgg
caggaagtacttagtctctctgtttcttgccaaatgaaaaaaatgtgcccctggaaagga
tctctgggcaagcttcaggatcacttgaaggagtgtgactttgtcaatgtgtcttgccct
aagaattgtggtaaggaaatccaaaggaaagatctaaaaaagcatttaagggatgactgt
ccgaccatcccttgcaccttctgcgctgaagaggttttgtggaatagattggagaatcat
ttccgagattgtcctcgataccctttgtcttgtgagaagtgtggaaaagaaaacattcca
agaaatgagatgcaagatcacaatgagaaagagtgtccaagagcagagctcaagtgtcct
ttcaatgtcgtaggctgtccatttgagggaactcgcccggcagtgaatgaacatgttaaa
gagaagatgttcagtcatttgacagacctcacaaaggaattcggagcattgaagattcag
cagtcaggctaccaagcacctaagagtcgctctcgacgcaccaggggtggggtagaagcc
caggagcaggctagtcaagaagtgcttctcagtaagttagcaacactgtgtcaagaacag
caaacggaaatcgatggactgagaggccgtgttaatgagatgagaggcacggtggagagt
ttggaaggccgccttaatgaatcgcacatgagggtggaattgcctttacaagaactcact
aacaggatcgttcgtcaagaaacgagagcgtttgagttcgaaggtcgtgtgtgcaatggc
tcttacatctggaggattgagaactaccgacagcttcgccaggatgccatcagcggtatt
gcgacggccgtacacagcccagccttgtataccagcctctatggttacaagctgtgcttg
cgtatcaacttgaatggcgtggacagtggagttggaagatacattgctctctttgttcac
atgatgcaaggcgattatgatagcatccttgagtggccatttactgggaggatcaccctc
accatcttggaccaatccgagggcaccgaatttcgtcagcacatcagcgagtcacttatt
gccacgcccaacctgttggcctttcagcggccaacagctccgcgcaactacaagggctat
ggccacgtggagtttgctccgatcgagcacatccgagatccccattacattaaaaacaat
accatgctggttcgcattcagattgatcattga
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