Acropora millepora: 114957717
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Entry
114957717 CDS
T06134
Name
(RefSeq) TNF receptor-associated factor 4-like isoform X1
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
amil
Acropora millepora
Pathway
amil04120
Ubiquitin mediated proteolysis
amil04140
Autophagy - animal
amil04144
Endocytosis
amil04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
amil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
114957717
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
114957717
04140 Autophagy - animal
114957717
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
114957717
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amil04131
]
114957717
04121 Ubiquitin system [BR:
amil04121
]
114957717
Enzymes [BR:
amil01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114957717
Membrane trafficking [BR:
amil04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
114957717
Ubiquitin system [BR:
amil04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
114957717
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-TRAF
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
TRAF3_RING
zf-RING_4
zf-TRAF_2
zf-RING_5
zf-rbx1
Sina_ZnF
zf-RING_6
Spc42p
Cas12f1-like_TNB
zf-Nse
DUF4391
DUF1664
eIF3_N
Motif
Other DBs
NCBI-GeneID:
114957717
NCBI-ProteinID:
XP_029191049
LinkDB
All DBs
Position
4:complement(2120845..2131558)
Genome browser
AA seq
456 aa
AA seq
DB search
MEEDFGLYIGDDEISVASDVASDDDLVDDQFEEVVVYDDGDLHQEIQFRLGGYEFEFVDE
VLPSQKCPVCLLTMRDAVQTSVCGHRFCRDCLHGILRSDNPICPNDRQEIEEEGGFFTDK
AWTRDILSLRVKCKQSKRGCDWIGEVRHAEEHQRDCPYEDTACSGCGENIQRRLLETHLD
DECPKRIVECAFCQDEFYFIQKQEHEEKYCKRFPLPCKNNCGHKNIPREEMAEHISEKCL
ETIVSCLYSSAGCPFQDKRAYLNDHNEATLEDHLEMAWGALVSTKRELDSLKDLRQKFHE
SEENNKELKKSMEACQDEILNLNHAVASLQLVTFKQREMMKDMEKKMEENVEKLASKVRR
SIEVGQLKTQRTLVKRKPTPGEVIYAPSLNDVRKGATDTPLRCKGNVNDYRNYLSISVHP
CQSLEGHAMSFSLEGPVISFSLKDEMQSGRATDREL
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagactttggcttgtacattggtgacgacgaaatttccgttgccagcgacgtc
gcctccgacgatgatttggtggatgatcagtttgaagaagtcgttgtttacgatgatgga
gatttacatcaagaaattcagtttcgtttaggtggttatgagttcgaatttgtggatgag
gtattgccgagccaaaagtgtcctgtatgcctgcttaccatgcgtgatgctgtgcaaact
tcagtttgtggtcatcgtttttgtcgagattgcttacacggaattttgaggagtgacaat
ccaatttgtccaaacgaccggcaagaaatcgaagaggaaggcggcttcttcactgacaaa
gcttggacaagggatattttatcccttcgtgttaagtgcaagcagagtaaaagaggatgc
gactggatcggtgaagtgcgtcatgctgaggagcatcagagagactgcccatatgaagac
accgcgtgttctggttgtggtgaaaacatacaacgacgcctcttagagacgcaccttgac
gacgaatgtcccaaacggattgttgaatgtgctttctgccaagacgagttctatttcatt
cagaaacaggaacacgaggagaagtactgtaagcgttttccgctaccttgcaaaaacaac
tgtgggcataaaaatataccaagagaagagatggctgagcacatttcagagaaatgcctt
gaaactattgtttcctgtttatactccagtgctggttgtccattccaggacaagagagct
tatttgaatgatcacaacgaggcgaccttggaggaccatttagagatggcgtggggtgct
cttgtcagcacgaaaagagagcttgacagcttgaaagatctgagacaaaagtttcacgag
tcagaagaaaacaataaagagttgaaaaaatccatggaagcctgccaagatgagattctc
aatttgaaccatgctgttgcaagtctccaactggtaactttcaagcaaagggagatgatg
aaagatatggaaaagaagatggaagagaatgtggagaagttagcaagcaaggttcggcgc
tccattgaagtgggtcaattgaagacacagcgcacgttagtaaagagaaaacctacccct
ggcgaagtcatttatgccccctcgttgaacgacgtacgaaaaggagctaccgacacccct
ctacgatgcaagggtaacgtaaatgactaccgcaattatctttctatttcagtgcatcct
tgccaatccctcgagggacatgccatgtcattctcgctcgagggacctgtcatatcattc
tcgctaaaagacgagatgcagtcgggtagggccacggatcgagagctctga
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