Acropora millepora: 114957717
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Entry
114957717 CDS
T06134
Name
(RefSeq) TNF receptor-associated factor 4-like isoform X1
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
amil
Acropora millepora
Pathway
amil04120
Ubiquitin mediated proteolysis
amil04140
Autophagy - animal
amil04144
Endocytosis
amil04517
IgSF CAM signaling
amil04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
amil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
114957717
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
114957717
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
114957717
04140 Autophagy - animal
114957717
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
114957717
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amil04131
]
114957717
04121 Ubiquitin system [BR:
amil04121
]
114957717
Enzymes [BR:
amil01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114957717
Membrane trafficking [BR:
amil04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
114957717
Ubiquitin system [BR:
amil04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
114957717
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-TRAF
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_UBOX
zf-C3HC4_3
TRAF3_RING
zf-TRAF_2
CCDC125
zf-RING_4
zf-RING_5
zf-rbx1
zf-RING_6
Cas12f1-like_TNB
Sina_ZnF
Spc42p
zf-Nse
DUF4391
DUF7602
DUF2207_C
DUF1664
CCDC39
eIF3_N
Motif
Other DBs
NCBI-GeneID:
114957717
NCBI-ProteinID:
XP_029191049
LinkDB
All DBs
Position
4:complement(2120845..2131558)
Genome browser
AA seq
456 aa
AA seq
DB search
MEEDFGLYIGDDEISVASDVASDDDLVDDQFEEVVVYDDGDLHQEIQFRLGGYEFEFVDE
VLPSQKCPVCLLTMRDAVQTSVCGHRFCRDCLHGILRSDNPICPNDRQEIEEEGGFFTDK
AWTRDILSLRVKCKQSKRGCDWIGEVRHAEEHQRDCPYEDTACSGCGENIQRRLLETHLD
DECPKRIVECAFCQDEFYFIQKQEHEEKYCKRFPLPCKNNCGHKNIPREEMAEHISEKCL
ETIVSCLYSSAGCPFQDKRAYLNDHNEATLEDHLEMAWGALVSTKRELDSLKDLRQKFHE
SEENNKELKKSMEACQDEILNLNHAVASLQLVTFKQREMMKDMEKKMEENVEKLASKVRR
SIEVGQLKTQRTLVKRKPTPGEVIYAPSLNDVRKGATDTPLRCKGNVNDYRNYLSISVHP
CQSLEGHAMSFSLEGPVISFSLKDEMQSGRATDREL
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagactttggcttgtacattggtgacgacgaaatttccgttgccagcgacgtc
gcctccgacgatgatttggtggatgatcagtttgaagaagtcgttgtttacgatgatgga
gatttacatcaagaaattcagtttcgtttaggtggttatgagttcgaatttgtggatgag
gtattgccgagccaaaagtgtcctgtatgcctgcttaccatgcgtgatgctgtgcaaact
tcagtttgtggtcatcgtttttgtcgagattgcttacacggaattttgaggagtgacaat
ccaatttgtccaaacgaccggcaagaaatcgaagaggaaggcggcttcttcactgacaaa
gcttggacaagggatattttatcccttcgtgttaagtgcaagcagagtaaaagaggatgc
gactggatcggtgaagtgcgtcatgctgaggagcatcagagagactgcccatatgaagac
accgcgtgttctggttgtggtgaaaacatacaacgacgcctcttagagacgcaccttgac
gacgaatgtcccaaacggattgttgaatgtgctttctgccaagacgagttctatttcatt
cagaaacaggaacacgaggagaagtactgtaagcgttttccgctaccttgcaaaaacaac
tgtgggcataaaaatataccaagagaagagatggctgagcacatttcagagaaatgcctt
gaaactattgtttcctgtttatactccagtgctggttgtccattccaggacaagagagct
tatttgaatgatcacaacgaggcgaccttggaggaccatttagagatggcgtggggtgct
cttgtcagcacgaaaagagagcttgacagcttgaaagatctgagacaaaagtttcacgag
tcagaagaaaacaataaagagttgaaaaaatccatggaagcctgccaagatgagattctc
aatttgaaccatgctgttgcaagtctccaactggtaactttcaagcaaagggagatgatg
aaagatatggaaaagaagatggaagagaatgtggagaagttagcaagcaaggttcggcgc
tccattgaagtgggtcaattgaagacacagcgcacgttagtaaagagaaaacctacccct
ggcgaagtcatttatgccccctcgttgaacgacgtacgaaaaggagctaccgacacccct
ctacgatgcaagggtaacgtaaatgactaccgcaattatctttctatttcagtgcatcct
tgccaatccctcgagggacatgccatgtcattctcgctcgagggacctgtcatatcattc
tcgctaaaagacgagatgcagtcgggtagggccacggatcgagagctctga
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