Acropora millepora: 114963880
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Entry
114963880 CDS
T06134
Name
(RefSeq) structural maintenance of chromosomes flexible hinge domain-containing protein 1-like isoform X1
KO
K23113
structural maintenance of chromosomes flexible hinge domain-containing protein 1
Organism
amil
Acropora millepora
Brite
KEGG Orthology (KO) [BR:
amil00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amil03036
]
114963880
03400 DNA repair and recombination proteins [BR:
amil03400
]
114963880
Chromosome and associated proteins [BR:
amil03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
114963880
DNA repair and recombination proteins [BR:
amil03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
114963880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMCHD1_S5
HATPase_c_3
SMC_hinge
HATPase_c
Motif
Other DBs
NCBI-GeneID:
114963880
NCBI-ProteinID:
XP_044184367
LinkDB
All DBs
Position
12:complement(20362370..20394157)
Genome browser
AA seq
2035 aa
AA seq
DB search
MKSSIKDEASPENDEEDAAVFIYDRRAGSRPQEKVQLGGIFNFTSFKEKSRQAFNIPADE
EFVIVTTNRKEISDDKAYEELVDGNETLYILQHAAQELSAPTEERVEYIPHYDTLVKSGM
YEYYASEGQNPLPFAFAELVDNALTATAENLGTRKIEIRLMFDESVGKPVVCIVDNGGGM
TSKELNNWAIYRLSKFNRQNGRKMVADLPRSLNSDISYFGVGGKQAIFFIGDATRMITKS
KDCNDIHELCISQAEFERREKMRESIYGGAILNRRAGDHSHVPADEANVKQLVEEEVERN
SFTCVVISGIKQERMVYLRTHFKQLCRQLSHIYHYYIHGPRGNDFQVGRARTASPFRNID
IQVVLYEKGKQPKRMELRDVNDDLQTRYIRTAASVFEFRANSESGGVVEGILRYHPFLYD
RETYPSLEGEFPVVVETGEEFAEAVERDSRAPRGSRPIFECYWNGRLIPYTSIDVLDWCQ
PPKKSTIPLECYNRFSGCLWTNDSFHVSTNKLTFMDLEVKIRDKNTMFSRVILGQEQRVN
ISRAFQDWVRECHENHDKQVQFIDFQGQIKRPDLPQKRNQSPWCVFNSIEWDGKIFKVGQ
LIRTQRTVPLICGTVKRFLLFGDHDGDVFATGGEMEIVQEPVSLYGDRKFFSLAKLDRSI
TLASIKKFVDDEEAKLPSKLIIEWPEQNKLEHNSKIPAGTTIGAMRVDILNGKGESVNKL
PGDRKRLLVELKVIWHGTSMDKDGDKIITNHVCQHGGKSWPYWFRKMENITHLGPHTLQL
QVLLSDSSTAPSFKSLPCHRIKFTVTEAHPNKFTVGMLETPLRVGVPFQIPLNLLDVFNN
PSKLSKEISPVLSASGLELTHQGTLVKVNSLVVKGVVALGSVPSHAGKDFNLKITLPGLA
EGSQSLKIRLLPGPPESLAVTPGDAEITVENNSSLQLQVQVQDKAGNVTVHPRLNVVCKL
TGLPSLPTYSGDCSSSGKATLTGADICLKHITKETRLKAKIELQHHKEVTPVEKTIIVTP
SSKAAELEVFYKPVDAKQGKKLEDGQELACTAGQTLTGLTFKVRDEGQREVVIDSLLANR
FKVNWTPKVSKDLIKQGILPDVKAPLSSDESKYCQVSMTGGAGLEFSFTLRPHADVPSVL
KCSCHNPYMRLGETLAADIILSVTDKHGNKTGKLPSHVLPEFHVSSDGLRESEVQLGFTA
DGNIVVKNIQFEEGPLGHRELAIKWKEMICYQRIEVISGPPAKLKILDLDHSEPISVFND
TQMPHPLTVQLCDKLGNHSDEANIKVVLNCDRGLKLTPTPAQQKTDTKGQATFGHLTVSA
AKGMYGIRIKALLGRISLDAPTVNVRVDPDPSKAVNLCVTFDSKAPCVVGELLPALSAHV
VGEDDAVMKPSSSRDIVLKIWHSKDGPVSDKPPARATTLYPSKSKSTDKDGEFYFRDLKV
PDLAGDYCMVVQFGSEGQVTLSSKPITFTAKAGRPVKLEPESIPATPTVSNTQRNNSRLL
VKTLKLQLKDKFDNLTGENLKGKVVISVNSSSEGIDEIPALAGNLYSTEVPLVKGVATVQ
NLLIQENTAGKDGQEYLLNFSAQIPANASPHPIPPFTLAFLFYNDVRKQQQMAQLTKERD
HLFETIRTYRLLFETTRQLINEMQVSVNEASLQEQKIRGELRKQNIAAGSLASVASVTSL
ITELSRKRDEISTTPRRQCLLHPGPRGDSGILGKVAHLAQVVDDDVARVLSWHMASDMDC
VVTLTTEKAKQVYRDSKGQQQVLPLDSIFRRSLPEWNRSLPHVRGNQSSYSPAGNPVYAR
DMLLFPTEADNCKLVFGMLLGDTLILDDLDCANKYRQEVVKYTHCPTILTRCGDRIRSNG
KFGGLQNKAPQLERMRGAVFAAPLPLAFHSLSTQIEQLQAYKQASIKHTQAKEELTQQLQ
HGQTEEMKVKHRECREAENQLRLIEERLGMTPTQYNMPPSPATMLLTEINTPPTRTSVSR
RSAARAAAAATASPTLSSVPVVNGTNTPSSNTSPRTRRGAPIAPEEVRSSKRTRR
NT seq
6108 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcttcaattaaggacgaagcatcccctgagaatgatgaagaagatgcagctgtc
tttatttacgacagacgagctgggagtcgacctcaggaaaaggttcagctaggtggcatt
ttcaattttacctctttcaaggagaagtctcgacaagccttcaacattccagcggacgaa
gagtttgttattgttaccaccaatcgcaaagagatctctgatgacaaggcgtatgaagaa
cttgtggatggaaatgaaacactgtacattttgcaacatgctgcccaagaacttagtgca
cccactgaagaaagagttgaatacattccacattatgacaccctggtcaaaagtggaatg
tatgaatattatgccagtgaaggacaaaatcccttgccatttgcttttgctgagcttgtg
gacaatgcattgactgctacagctgagaatttagggacaagaaaaattgaaataaggctg
atgtttgatgaatcagttggtaaacctgttgtttgcattgtcgacaacggtggtgggatg
acgtcaaaggaactgaacaactgggcgatatatcgtctatcaaagttcaaccgtcaaaat
ggaaggaaaatggtggcagatcttccaaggtccttaaatagtgatatttcgtactttgga
gttggtggaaaacaagctatctttttcattggtgatgcaacccggatgatcaccaagtcc
aaggattgtaatgacatccatgagctgtgcatttctcaagcggaatttgagcgcagagag
aaaatgcgagagtccatttacggaggcgctattctcaatagaagggcaggagatcacagc
catgtgcctgcagacgaagcaaatgtcaaacaacttgttgaggaggaggtcgagaggaac
agtttcacttgtgtggtaatatcagggatcaagcaggaaaggatggtatacctgaggact
catttcaagcagttatgcaggcagctgtcgcacatttaccattattatattcatggacct
cgtgggaatgatttccaagtgggaagagcaagaactgcaagtcctttcagaaacattgat
attcaggttgtactgtatgaaaaaggtaagcagcccaagaggatggagctgcgagatgtt
aatgatgatttgcaaacacgttacatcaggacagctgcttctgtgtttgagttccgtgca
aattcagagtcaggcggtgttgtggaaggtatcctgcgttaccatccatttctttacgac
agagaaacatatccatctcttgagggagaatttccagtagttgttgaaacaggtgaagaa
tttgccgaggcagtggagagagacagccgagcgcctagaggaagtcgtccgatttttgag
tgttattggaatggacgactcatcccctacacctctatagatgtacttgactggtgccag
cctcctaagaagtcaaccatcccattggagtgttataacagattctctggatgtctttgg
acaaatgatagttttcatgtgagcacaaacaagctgacgtttatggatttggaagtgaaa
atcagagacaagaacaccatgttcagcagagtcatcctgggacaggaacaaagagttaac
atttccagagcatttcaggactgggtgagggaatgccatgaaaaccatgacaagcaggtc
cagttcatagattttcaaggtcagattaaacgcccagaccttccacagaagcgaaatcaa
agtccttggtgtgtcttcaactccattgagtgggatggaaagatctttaaagttgggcaa
ctgataagaactcaaaggacagttccattgatttgcggaactgtaaagagatttctcctt
tttggtgaccatgatggagatgtgtttgcaacaggtggcgagatggagattgttcaggag
cctgtttcattatatggggacagaaagttcttttccttggctaagttggaccgctcaata
actcttgcttcaattaagaaatttgtggatgatgaagaagcaaagctgcccagcaagttg
atcatagaatggccagagcaaaacaagctggaacacaactcgaaaattcctgctggaacc
accataggggccatgagggttgatattctaaatggaaaaggtgaatctgtcaacaaactt
cctggtgacaggaaaaggttattggtggaactgaaggtcatttggcatggtacttctatg
gacaaagatggagacaaaatcattaccaatcatgtttgtcaacatggtggaaaaagttgg
ccttattggttcagaaaaatggagaacatcactcaccttggtcctcacactctccagctg
caagttcttctaagcgacagttcaacagcaccatctttcaagagcctgccttgtcatcgt
ataaagttcaccgtcacagaggctcaccccaataaattcactgttggaatgttggaaacc
ccactcagagttggagtaccatttcagattccacttaaccttcttgatgtatttaacaat
ccttcaaaattgtccaaagaaatttctccagttttgagtgcaagtggtttggagttgact
catcaaggaacattagtgaaggtcaacagtcttgttgtcaagggtgttgttgctctgggc
tctgtaccatcacatgctggaaaggacttcaatctcaagattactttgccaggacttgca
gaaggatcacaaagcttaaaaattagactccttccaggtccaccggagtcgttggcagtg
acaccaggagatgctgagatcacagttgaaaacaacagctctctgcagttacaagtccag
gttcaggataaggcaggaaatgtaacagttcatccaagactcaatgttgtttgcaagctg
acaggtctaccaagtttgcctacatacagtggagactgcagctcctctggcaaggccacc
ttaacaggtgctgacatctgtctaaagcatatcaccaaggaaacaaggctgaaggcaaag
attgaactacagcaccataaagaagtcactccagttgagaagacaattattgtgacgcca
agcagtaaagcagctgaactggaagtgttttacaaaccagtggatgctaaacaagggaaa
aagcttgaggatgggcaggagttagcctgcacagcaggacaaacactcacaggattgact
ttcaaagttcgcgatgaaggacagagagaagttgtgattgacagcttgttggccaatcga
ttcaaggtcaactggacccctaaagtttccaaagatctcattaagcaaggaatccttcca
gatgtcaaggcaccattgtcctctgatgaatcgaagtattgtcaagttagtatgacaggt
ggagcaggacttgagttttctttcacattaagacctcatgctgatgttccaagtgtgctt
aagtgttcttgccacaatccttatatgagactgggagagaccttagcagctgatattatt
ctttccgttactgataaacacggtaataaaactggcaagctgccaagtcacgtccttcct
gaattccatgtttcatctgatggactgagagaaagtgaggtccaactgggattcacggct
gatggaaacattgttgtcaagaatattcagtttgaggagggtcctctgggtcaccgagaa
cttgccatcaagtggaaggaaatgatatgctatcaaaggatagaggttatttcaggacca
cccgctaagctcaagattcttgatttggatcactctgagccaatttcagtgtttaatgac
acccaaatgccacaccctcttacggttcaactttgtgacaagctgggaaaccattcggat
gaggcaaacatcaaagtcgtgctaaactgcgatagagggctgaagttgactccaacccca
gctcagcaaaagacagacactaagggtcaagccacatttggccatctcacagtaagcgca
gccaaagggatgtatggaatcagaataaaggctttacttgggagaatatctttagatgct
cctactgttaacgtcagagtggatcctgatccatccaaagctgtgaatctttgtgtaaca
ttcgactccaaggcaccttgtgtggtcggcgagttattgccagccttgtcagcgcatgtt
gttggagaggatgacgctgtcatgaaaccgtcgagttcaagagacatagttctgaagatc
tggcactcaaaagacggaccagtatcggacaaaccgcctgccagggcaacaaccttgtat
ccgtcaaagtcaaaatcaactgataaagatggagagttctactttagggacctcaaggta
cctgatttggcaggagactattgcatggtggtgcagtttggatccgaaggtcaagtcacg
ctatcaagtaaaccgatcacattcacagccaaagctgggcgtcctgtgaagcttgaacct
gaatcgattcctgccacgcccacagtgtccaacacgcaaaggaacaacagcaggctgttg
gtgaagacgctcaagctgcaactcaaggataagtttgacaatctaactggtgaaaacttg
aaagggaaagtggtcatcagcgtgaactcgtcctcagaaggaatcgatgaaattcccgca
ctggccggcaatttgtactccactgaggtcccccttgtgaagggcgtggccactgtacaa
aacctcctcatacaagagaatactgcaggaaaagatggacaggaatatctactgaacttc
agcgctcagattccggccaatgcatcgccccatccgattccaccattcaccctagctttc
ctgttctacaatgatgttcggaagcagcagcagatggcgcagttgacaaaagagagagat
catctatttgaaaccatccgcacttaccgccttctctttgaaacaacgcgccaacttatc
aacgagatgcaagtttcagtaaacgaggcctctttgcaagaacagaagataagaggagaa
ctcagaaagcagaacatagcggccggcagcttggcctcggttgcttcggtgacttcactg
ataactgaattgtcaagaaaaagggacgagatttccacgacaccgcggagacaatgtctg
ctgcatccgggacctcgtggggacagcggtattcttggaaaggttgctcatttggctcaa
gtggtggatgatgacgtagcacgggtgttgtcgtggcatatggcttctgatatggactgt
gttgttactcttaccacagagaaggctaaacaagtgtaccgtgattcaaaaggccagcaa
caagttcttcctttagattccatatttagacgaagtttacccgaatggaacagatccttg
cctcatgtacgtggtaatcaaagtagctactccccagctggtaaccctgtgtacgcaaga
gatatgctgctctttcctacagaagctgacaactgcaagctagtgtttggcatgttgttg
ggggatacattgatacttgatgacttggactgtgcaaataaataccgacaagaggttgtg
aagtacacccattgccccacgattttaacaagatgtggagatcgcatcagaagtaatggc
aaatttggtggacttcaaaataaagcccctcagttggaaagaatgcgcggcgcagtgttc
gctgcgccgctgccgctggcatttcattcactgtcgacgcagattgaacaattacaagcc
tacaaacaagctagcatcaaacacactcaagctaaggaagaacttacgcaacaactacag
cacggtcaaacagaagagatgaaagtaaaacaccgcgaatgcagagaggcggaaaatcag
ttgcgcttgatagaggaacgcctgggtatgacaccgacgcagtacaatatgccgcccagt
ccagctaccatgctactcacagaaataaacacgcctccgacaagaacatcggtatctcgt
cggtccgccgctcgagcggctgcggcagcgacagcgtcaccgacgttgtcatcggtgcct
gtcgtaaacggcacgaacaccccgtcgtcaaatacttctccacgaacaagacggggtgct
ccgatcgctcccgaagaagtccggtcaagtaaacgtactcggagatga
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integrated database retrieval system
