Acropora millepora: 114972305
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Entry
114972305 CDS
T06134
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component-like isoform X1
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
amil
Acropora millepora
Pathway
amil03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
amil00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114972305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
amil03041
]
114972305
Spliceosome [BR:
amil03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
114972305
Complex C
U5 SnRNP specific factors
114972305
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_IV
EFG_C
GTP_EFTU_D2
EFG_III
EFL1
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
114972305
NCBI-ProteinID:
XP_044179496
LinkDB
All DBs
Position
7:complement(18770462..18787009)
Genome browser
AA seq
973 aa
AA seq
DB search
MEADLYDEFGNYIGPEIESDEESEDDDEVGEEEAVEYAEDDEDEQMDQDDEPQMQVVLHE
DKKYYPTAEEVFGPEVETIVQEEDTQPLTEPIIKPVAKKKFFHAEQDLPATNYDVEYLAD
LMDNSELIRNIALAGHLHTGKSVFVDCLVEQTHPDIQAKEGTDLRYTDTLFTEQERGLSI
KSVPVSLVLPDTKGKSFLINVFDTPGHVNFSDEVTAALRMCDGVIIFIDASEGVMLNTER
LLKHAVQERLAITICINKIDRLILELKLPPTDAYYKLKHIVDEINGLLSVYSDGDNDYVM
SPLIGNVCFASSQYRFCFTLYSFASLYVDTFGGGIDPKDFAKRLWGDMYFNSKSRKFTRK
APLSTSQRSFVEFILEPLYKIFSQVVGDADVCFPRLLDELGIHLSKSEMQMNIRPLLSLV
CRRFFGDFTGFVDVCVQHVPSPKKAAKSKVEYVYTGPLDTELVESMNDCDPEGPLMLHTS
KQYPSQDATAFHVFGRVMSGTIHAGQQARILGENYTIEDEEDSRVGTVGRLWIAEARYNI
EVNRVPAGNWVLIEGIDEPIVKTSTITQVQGNDEAYIFRPLKFNTCSAIKIAVEPHNPSE
LPKMLDGLRKVNKSYPLLTTKVEESGEHVILGTGELYLDCVLHDLRKMYSEIDIKVADPV
VAFCETVVETSSLKCFAETPNKKNKVTMIAEPLEKGLAEDIENEKVLITWNKKKLGEFFQ
TKYDWDLLAARSIWAFGPDNSGPNILVDDTLPSEVDKSLLNTVKDSIIQGFQWATREGPL
CDEPIRNVKFKILDAVIAGEPIHRGGGQIIPTSRRVAYSAFLMATPRLMEPYFFVEVQAP
ADCVSSVYTVLARRRGHVTQDAPVPGSPLYTVKAFIPAIDSFGFETDLRTHTQGQAFCLS
VFHHWQIVPGDPLDKSITIRPLEPQPATHLAREFMIKTRRRKGLSEDVSINKFFDDPMLL
ELARQDVMFNYPM
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atggaggctgatttgtatgatgaatttggaaactacatcgggccagaaatcgagagtgac
gaagagagcgaagacgatgatgaggttggagaggaagaagctgtagaatatgcagaagat
gatgaagatgagcagatggaccaagatgatgaacctcaaatgcaagttgtgttacatgag
gataaaaagtattatcctactgcagaggaagtttttggtcctgaggtggagactatagta
caagaggaagacacacagcctttaacagaaccgattatcaaacctgtggcaaagaagaag
ttttttcatgcagaacaggatctaccagcgactaattatgatgtcgaatacttggcagat
ttaatggacaactcagagcttataagaaatattgcactggctgggcatcttcacactgga
aagtcggtttttgtggactgcctggtcgagcaaactcatccagacattcaagccaaagaa
ggaacagatctgcgttatacggacaccttgttcacagagcaggagcgaggcttgagcatc
aagagtgtacctgtgtcacttgttttacctgacaccaagggaaagtcctttttgatcaat
gtttttgatactccaggacatgtgaatttctctgatgaagtaacagcagctcttagaatg
tgtgatggagtgatcattttcattgatgcatcagaaggagttatgttgaatacagaaagg
ctcctcaaacatgcagttcaagaaagactggctataactatttgtattaacaagattgac
agactgattttggaattgaagctgccacctacagatgcttactataaactgaaacacatt
gtggatgaaatcaatgggcttttgagtgtgtattcagatggtgacaatgattatgtcatg
tcacccctcattggaaatgtgtgttttgccagttcacaataccgattttgcttcactctc
tattcatttgcatctctttatgttgacacttttggtggaggcattgatccaaaagatttt
gccaagcgactgtggggagatatgtactttaattccaaatcacggaaattcacacgcaag
gcccctctgagtacctctcaaaggagctttgtagaattcatcctggaaccactgtacaaa
atattttctcaggttgttggagatgcagatgtctgttttcccagacttcttgatgagctg
ggtatccatttatccaagtcagagatgcagatgaatatcagaccgcttctcagtcttgtc
tgcagaagattctttggagattttacaggtttcgtagatgtctgtgttcagcatgttcct
tcgcccaaaaaggctgcaaaatcaaaggttgaatatgtgtacacaggacctctggacacc
gaacttgttgaatccatgaacgattgcgatcctgagggaccactgatgctccacacttca
aagcagtatccatcgcaagatgccacagctttccatgtttttggtcgggtcatgagtgga
acaattcatgctggacaacaggccagaatccttggcgagaactacactatagaagacgaa
gaagattctcgagttggaacggttggcagactttggattgcggaagccaggtacaatatc
gaagtcaaccgtgttcccgctggaaattgggtattaatagaaggaattgacgaaccaatt
gtgaaaacatcgactatcacacaagtacaaggcaatgacgaggcttacatcttcaggccg
ctaaaattcaacacctgttcagccatcaagattgccgttgaaccgcacaatccttcggag
ttgcccaaaatgttggatggcttaagaaaagtcaacaagagttacccgttgctaaccacg
aaagttgaggaatctggagaacacgttattcttggaacaggagagctgtatttggactgt
gtgcttcatgatttgagaaagatgtattccgaaatcgatataaaagttgctgatcccgtt
gtagcattctgcgaaacagtcgtggaaacctcatcgctgaaatgttttgcagaaacgcca
aacaagaagaacaaggttaccatgattgccgaacctttggagaaaggtttagccgaagac
attgagaatgagaaagttctgattacttggaacaaaaagaaactgggggagtttttccaa
accaagtacgattgggatttgctggctgctcgctcgatctgggcatttggacccgataac
tcgggacccaacattttagtggacgatacattgccatctgaggtggacaagagtctcctt
aacactgtcaaggattccatcatccaaggtttccagtgggccactagagaaggaccactc
tgcgacgaacccataaggaacgtcaaattcaagattctggacgctgtaattgccggtgaa
ccaatccacaggggcggtgggcaaatcattcctacctctagacgagttgcttactctgcc
ttccttatggccactcctcggcttatggagccatattttttcgtcgaggtccaggccccc
gcagattgtgtttcttcggtttataccgtacttgcacggcgaagaggccatgtcacccag
gatgcacctgttcccggctcgccgctgtacacagtcaaagctttcattcccgccattgac
tcgtttggatttgaaaccgatctgaggacacacacacagggacaagccttctgtctttca
gtctttcatcactggcagattgttcctggtgatccactcgataaaagcatcactatccgt
cctctggaacctcagccagctacacacctcgcccgtgaattcatgatcaaaacacggagg
agaaagggtttgagcgaggatgtcagtattaacaagttcttcgacgatcctatgttgctg
gagttggcccgccaagatgtcatgtttaattaccccatgtaa
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