Acropora millepora: 122958244
Help
Entry
122958244 CDS
T06134
Name
(RefSeq) TNF receptor-associated factor 6-like isoform X1
KO
K03175
TNF receptor-associated factor 6 [EC:
2.3.2.27
]
Organism
amil
Acropora millepora
Pathway
amil04120
Ubiquitin mediated proteolysis
amil04140
Autophagy - animal
amil04144
Endocytosis
amil04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
amil00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122958244
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122958244
04140 Autophagy - animal
122958244
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
122958244
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amil04131
]
122958244
04121 Ubiquitin system [BR:
amil04121
]
122958244
Enzymes [BR:
amil01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122958244
Membrane trafficking [BR:
amil04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
122958244
Ubiquitin system [BR:
amil04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
122958244
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-C3HC4_4
zf-RING_UBOX
Sina_ZnF
TRAF3_RING
zf-C3HC4_3
zf-TRAF_2
zf-RING_5
U-box
RING_XB3-XBAT31
TPR_MLP1_2
zf-DNA_Pol
Motif
Other DBs
NCBI-GeneID:
122958244
NCBI-ProteinID:
XP_044174913
LinkDB
All DBs
Position
4:20576663..20596843
Genome browser
AA seq
525 aa
AA seq
DB search
MNRSFGTEDSSSFLRVTSTNPVSLFGRNEPPSRFPERLQSEGYDEYFDPPLENKYECPIC
LLGLREPVQTLCGHRFCRGCILRSIRDAGPKCPVDNEHLEEWQLNPDNFARREMLNHPVF
CRLKKLYECPWKGPLSKLEDHLKECDFVDVLCPKNCGREFQRKDLKKHLEDDCPNRTIPC
TFCAEEFLWNSMENHFQDCPQYPLSCEKCGKENIPRNEMQDHNEKECPTAELKCPFNVVG
CQFEGPRPAVNEHVKEKMFSHLTDLIKEFGQWKLDRPGLQAPQSRSRRTRGGLEAQEQAS
EAVLPSNLVTLCQQQQTEIDRLRGLVNDLTSAVERLERRHDESRMRVETQLQELSIRVNR
QETRAFEFEGRVCNGSYIWRIENYRQRRQDAISGIATAVHSPAFYTSLYGYKLCLRINLN
GVDSGVGRYIALFVHMMQGDYDSILEWPFTGRITLAILDQSEGTEFRQHISETLIAKPSL
LAFQRPTAPRNYKGYGYVEFAPIEHIRDPQYIKNNTMLVRIQIDH
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgaatcgctcgtttggtacagaagacagctcttcgtttctaagggtaacaagcacaaat
cctgtcagtctttttggaagaaatgaaccaccgtcgaggtttcctgaaaggcttcagtct
gaaggttatgacgagtacttcgatcctcctttagaaaacaaatatgaatgtccaatctgt
cttttgggtcttcgcgaaccagtgcaaactctttgtggacacagattttgtcgaggttgc
attttgcgttcaataagggatgctggtcccaagtgtccggttgataatgaacatctggag
gagtggcagctcaatccagacaactttgcccggcgggaaatgcttaatcaccctgttttt
tgccgattaaagaaactgtatgagtgcccatggaaagggcctctaagcaagcttgaggat
cacttgaaggagtgtgattttgttgatgtgttgtgccctaagaattgcggtagggaattc
caaaggaaagatctaaaaaagcatttggaggatgactgcccgaataggacaatcccttgc
accttctgcgccgaagagtttttgtggaatagcatggagaatcatttccaagattgccct
caatatcctttgtcttgtgagaagtgcggaaaagaaaatattccaagaaatgagatgcaa
gatcacaatgagaaagagtgtccaacggcggagctcaagtgtcctttcaatgttgtgggc
tgtcaatttgagggacctcgtccagctgtgaatgaacatgttaaggagaagatgttcagt
catttgacggacctcataaaggaattcggacaatggaagttggatcggccaggcctccaa
gcgccgcagagtcgctcccgacgcaccaggggtgggttagaagctcaggagcaggctagt
gaagccgtgcttcccagtaatttggtaactctttgtcaacaacagcaaacggaaatcgat
agactgagaggcctggttaatgacttgacgagcgcggtagagcgtttagaacgccgccat
gatgaatcgcgcatgagggtggaaacgcagttgcaagaacttagtatcagggtcaaccgt
caagaaacgagagcgtttgagttcgaaggccgtgtgtgcaatggctcttacatctggagg
attgaaaactaccgacagcgtcgccaggacgccatcagcggcattgcgacggccgtacac
agcccagccttctataccagcctctatggttacaagctgtgcttgcgtatcaacttgaat
ggcgtggacagtggagttggaagatacattgctctgtttgttcacatgatgcagggcgat
tatgatagcatccttgagtggccatttaccggaaggatcacccttgccatcttggaccaa
tccgagggcaccgaatttcgtcagcacatcagcgagacccttattgccaagcccagtcta
ctggcctttcagcggccaacagctccgcgcaactacaagggctatggctacgtggagttt
gctccgatcgagcacatccgcgatcctcagtacattaaaaacaataccatgctggttcgt
attcagattgatcattga
DBGET
integrated database retrieval system
