Advenella mimigardefordensis: MIM_c36950
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Entry
MIM_c36950 CDS
T03016
Symbol
metH
Name
(GenBank) methionine synthase
KO
K00548
5-methyltetrahydrofolate--homocysteine methyltransferase [EC:
2.1.1.13
]
Organism
amim
Advenella mimigardefordensis
Pathway
amim00270
Cysteine and methionine metabolism
amim00450
Selenocompound metabolism
amim00670
One carbon pool by folate
amim01100
Metabolic pathways
amim01110
Biosynthesis of secondary metabolites
amim01230
Biosynthesis of amino acids
amim04980
Cobalamin transport and metabolism
amim04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
amim00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
MIM_c36950 (metH)
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
MIM_c36950 (metH)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
MIM_c36950 (metH)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
MIM_c36950 (metH)
04980 Cobalamin transport and metabolism
MIM_c36950 (metH)
Enzymes [BR:
amim01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.13 methionine synthase
MIM_c36950 (metH)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Met_synt_B12
S-methyl_trans
Pterin_bind
B12-binding_2
B12-binding
CarboxypepD_reg
Motif
Other DBs
NCBI-ProteinID:
AHG65753
UniProt:
W0PLA0
LinkDB
All DBs
Position
complement(4258280..4262056)
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AA seq
1258 aa
AA seq
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MSYPALPYPVESYTSGARFVQELQKGRILVLDGAMGTMIQRYKLTEADFRGERFAEHHQD
VKGNNELLSLVRPDIISEIHEQYLQAGADVIETNTFGATFVAQGDYDLPDLAYELNLESA
RLARKACDNYSTPERPRFVAGALGPQPKTASISPDVNDPGARNITFEQLQAAYEEQLSGL
LDGGIDIVLIETIFDTLNAKAAIFAVETVFEQRGIRLPVMISGTVTDASGRILSGQTVEA
FWNSVRHARPVTIGLNCALGAALMRPYIAELSKICDTWLCVYPNAGLPNPMSDTGFDETP
DDTSSLLEEFASAGFVNMVGGCCGTTPDHIAAIAQKVQQLPARTVPEVPVKTRLSGLEAL
NIDDESLFVNVGERTNVTGSKMFLRLIREEKFDEALTVARQQVENGAQIIDINMDEAMLD
SKANMRRFLNLIASEPDIARVPIMIDSSKWEVIEEGLKCVQGKPIVNSISMKEGVEPFLA
HARLCRKYGAAVVVMAFDEEGQADTLQRRKDICGKAYHLLVDELDFPPEDIIFDPNVFAV
ATGIEEHNHYAVDFIEGTRWIHDNLPHARISGGVSNVSFSFRGNEAMREAIHTVFLYYAI
QEGMTMGIVNAGMLGVYADLDPKTRDLVEDVILDRPEPVGKTDPADERTPTERLVEYADE
VKGSGTKKEVDLSWREQEVEKRLSHALVHGITQFIVEDTEEVRQKIAARGGRPIEVIEGP
LMDGMNVVGDLFGAGKMFLPQVVKSARVMKHAVAHLIPFIEEEKRQIEAAGGDVRAKGKV
VIATVKGDVHDIGKNIVTVVLQCNNFEVVNMGVMVPCAQILAKAKEEKADIVGLSGLITP
SLEEMAYVASEMQRDPYFRENKIPLLIGGATTSRVHTAVKIAPHYDGPVIYVPDASRSVG
VATNLVSEQVDSYLAQVREEYELVRERHANRKATPIIPLEEARKGAPAIDWSNYTPPKPK
FLGRREFRNFDLAQIVPFIDWTPFFQTWSLFGQYPKILQDEVVGEQARKLFDDAQAMLKK
VVEQRWLSAGGVVAFYPANSVNHEDIEVYTDESREQVLFTWRNLRQQNAKREGVANKCLA
DYIAPKETGVKDYIGLFAVTGGIGIEKHEQRFEAEMDDYSSILLKALADRFAEGFAECMH
ARVRRDLWGYVGDENLDNQALIDEKYQGIRPAPGYPACPEHRVKVDMFKVLQTEDIGMQL
TDGMAMYPASSVSGFYLSHPDSSYFNVGTIGQDQLQDYIARSGLPEEEVRRSLMSVLG
NT seq
3777 nt
NT seq
+upstream
nt +downstream
nt
gtgtcttatcctgccctgccttatcccgtcgaatcctatacctctggtgcccgttttgtg
caggaactgcagaagggccgaatcctggtgctggacggggccatgggtaccatgatccag
cgctataagctgaccgaggccgattttcgcggtgagcgctttgctgagcatcatcaggac
gtcaaaggcaataacgagctgctgtcgctggtgcgtcccgatatcatcagcgagatccat
gagcagtatctgcaggccggggccgatgtgatcgaaaccaacacctttggtgccaccttc
gtggcccagggtgattatgacctgccggatctggcctatgaattgaatctggaatctgcc
cgtcttgcgcgcaaggcctgtgataactacagtacacctgagcgtccaaggtttgtcgct
ggcgcgctcggcccccagccaaagaccgcctccatctcgcccgacgtgaacgatccgggg
gcgcgcaatattaccttcgaacaattgcaggcagcgtatgaagagcaactgagcggcctg
ctcgatggtggtattgatatcgtgctgatcgagacgattttcgatacgctgaacgccaag
gcggcgattttcgcggtggaaacggtgttcgaacagcgcgggatccgactgccggtgatg
atctccggtacagtgaccgacgcatcgggacggattctgtctggccagaccgtagaggcc
ttctggaattcggtgcggcatgcgcggccagtcaccattggcctgaactgcgccctgggt
gcggccctgatgcgcccgtacatcgccgagctgtccaaaatctgtgatacctggctgtgc
gtctaccccaacgccggcttgcccaatcccatgagcgacaccggtttcgatgaaacgcca
gacgatacctccagtctgctggaagaatttgcgagtgccggatttgtgaatatggtgggc
ggctgttgcggcacgacgcccgaccatattgccgccattgcgcagaaagtgcagcaattg
ccggcgcgcaccgtgcccgaggtgccggtcaagacccgcctgtctggtctggaagccctg
aatattgatgatgagtcgctgtttgtgaacgtgggtgaacgtaccaacgtgaccggcagc
aagatgttcctgcgcctgattcgcgaagaaaaatttgatgaggcgctgacagtggcgcgc
cagcaggtcgaaaacggcgcacagatcatcgacatcaatatggacgaggccatgctggat
tcgaaagcgaatatgcgccgctttctgaatctgatcgcctccgaacccgatattgcccgg
gtaccgatcatgatcgacagttccaaatgggaagtgatcgaagagggcctcaagtgtgtg
cagggcaagcccatcgttaactccatttccatgaaggaaggcgtggagccgtttctggcg
cacgcccgcctgtgccgcaagtacggcgcggccgtggtggtgatggcgttcgatgaggaa
ggccaggccgatacgctgcaacgacgcaaggacatttgtggcaaagcctatcatttactg
gtagatgaactggattttccgccggaagatattattttcgaccccaatgtgttcgccgtc
gcgaccgggatcgaggaacacaatcactacgccgtggactttatcgaaggcacgcgctgg
attcacgacaatctgccgcatgcgcgcatctccggcggggtgtccaatgtgagcttctcg
ttccgtggcaatgaagccatgcgtgaagcgattcataccgtattcctgtattacgcgatt
caggaaggcatgaccatgggcattgtgaatgccggtatgctgggtgtctacgccgatctg
gatccgaaaacgcgggatctggttgaagacgtgatactggatcggcccgagcctgtcggc
aaaaccgacccggccgatgagcgcaccccaaccgagcgcctggtggaatatgccgatgag
gtcaaaggcagcggtacgaaaaaagaagtggatctgtcctggcgtgaacaggaagtggaa
aagcgcctgtcacatgcgctggtgcatggtattacccagttcattgttgaggataccgaa
gaagtgcggcaaaaaattgccgctcgtggcggtcgtcccattgaggtgattgaaggcccg
ctcatggacggcatgaacgtggtgggtgacctgtttggcgccggcaagatgttcctgccg
caggtggttaagtctgcacgggtgatgaagcatgcggtggcgcacctgattccgtttatt
gaagaagaaaaacgccagatcgaagcggctggtggcgatgtacgcgccaagggtaaggtc
gttattgcaactgtgaaaggcgacgtgcacgatatcggcaaaaatatcgtcacggtggta
ctgcaatgtaataacttcgaagtggtcaatatgggcgtgatggtgccgtgcgcgcagatt
cttgccaaggccaaagaagagaaggccgatatcgtgggtctgtccggcctgatcacgccg
agcctggaagagatggcttacgtggcttccgagatgcagcgtgatccttacttccgtgaa
aacaaaattccattactgattggcggagccaccaccagccgggtacatacggctgtcaag
attgcaccgcattatgatggcccggtcatctatgtacccgatgccagccgctcggtgggc
gtggccaccaatctggtctccgagcaggttgatagctatctggcgcaggtgcgcgaggaa
tatgaactggtgcgtgaacgtcacgccaatcgcaaggcaacacccatcatcccgctggaa
gaggcgcgcaagggcgccccggcgatcgactggagcaattacacgcctccgaagccgaag
tttttggggcgtcgtgaattcaggaacttcgatctggcgcaaatcgtgccgtttatcgac
tggacaccgttctttcagacctggagcctgtttggtcagtatccgaagattctgcaggat
gaggtggtgggagagcaggcacgcaagctgttcgacgacgcgcaggcgatgctcaaaaaa
gtggtggagcagcgctggctgagcgcgggcggtgtcgttgcgttctatccggccaacagt
gttaaccacgaagatatcgaagtgtataccgatgagtcacgggaacaggtgctgtttacc
tggcgtaatttgcggcagcaaaatgccaagcgtgaaggagtggccaacaaatgtctggcc
gactacatcgcgcctaaggaaactggcgtgaaggactatatcggtctgtttgccgtaacc
ggtgggattggcatagagaagcatgagcaacggttcgaagccgaaatggacgactattcg
tcgattctgctcaaagccctggctgaccgttttgccgaagggtttgccgaatgcatgcat
gcccgggtccggcgggatctgtggggttatgtcggtgatgaaaatctggacaatcaggcg
ctgatcgacgaaaaatatcagggcatccgtccggcgccgggctaccccgcctgtcccgag
catcgtgtcaaagtggatatgttcaaggtcttgcagaccgaagatatcggcatgcagttg
accgatgggatggccatgtacccggcatccagcgtgtctggcttttatctgagccatccg
gactccagctatttcaatgtggggaccataggtcaggatcaattgcaggattacatcgcc
cgcagtggattgcctgaagaagaagtgcgccgttcactgatgagcgtattggggtag
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