KEGG   Anarhichas minor (spotted wolffish): 142931691
Entry
142931691         CDS       T11660                                 
Symbol
smndc1
Name
(RefSeq) survival of motor neuron-related-splicing factor 30
  KO
K12839  survival of motor neuron-related-splicing factor 30
Organism
amir  Anarhichas minor (spotted wolffish)
Pathway
amir03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:amir00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    142931691 (smndc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:amir03041]
    142931691 (smndc1)
Spliceosome [BR:amir03041]
 Complex A
  U2 snRNP components
   U2 related factors
    142931691 (smndc1)
 Complex B
    142931691 (smndc1)
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    142931691 (smndc1)
SSDB
Motif
Pfam: SMN_Tudor TUDOR PUA_4 DUF2067 SH3_AtC3H22
Other DBs
NCBI-GeneID: 142931691
NCBI-ProteinID: XP_075931861
LinkDB
Position
Unknown
AA seq 236 aa
MSDDLVKQLSSYKAQLQQVEVALSTDQDNEDLLKLQKDLQEVIDLTKDLLTSQPTESSSS
TNGSDPVPSKHGWKVGDSCMAVWNQDGQVYEAEIEEIDRENGTAAVTFAGYGNAEVIPLQ
NLKAVEEGKRSNEDGKPKSRKEQIAEQREYKKKKAQKKVQRMKELETEREEQKSKWQQFN
NKAYSKNKKGQVKRSIFASPESVNGKVGVGTCGIADKPMTQYHDTSKYNVRHLMPQ
NT seq 711 nt   +upstreamnt  +downstreamnt
atgtcggacgacttggtgaaacagttgagcagctacaaagcccagctacagcaagtagaa
gtcgctttatctaccgaccaagacaatgaagacctccttaaactccagaaagacttacag
gaagtcattgacttgacgaaagacctcctgacctcacagcccactgaaagttcttctagc
accaacggctcagaccctgtaccctcgaagcatggctggaaagtgggagacagctgtatg
gctgtttggaatcaggacggacaggtgtatgaggctgagattgaggagatagaccgggag
aacggcactgcagccgttacctttgccgggtacgggaacgctgaagtgattcctctgcag
aacctcaaagcagtagaggaggggaaacgctccaacgaggacgggaagcccaaatcaagg
aaagagcagatagccgagcagagagagtacaagaagaagaaagcccagaagaaggttcag
aggatgaaggagttggagactgagagggaggagcaaaagtcaaagtggcaacagttcaac
aacaaagcctactcgaagaacaagaaaggacaggtcaagaggagcatatttgcatctcca
gaaagcgtcaatggaaaggtgggagtgggaacatgtggtattgcagacaagccaatgact
cagtaccacgacacgtcaaaatacaacgtcagacatctaatgccacaatga

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