Anarhichas minor (spotted wolffish): 142941603 Help Entry 142941603         CDS       T11660                                  Symbol thbs1b Name (RefSeq) thrombospondin-1   KO K16857   thrombospondin 1 Organism amir  Anarhichas minor (spotted wolffish) Pathway amir04115   p53 signaling pathway amir04145   Phagocytosis amir04148   Efferocytosis amir04350   TGF-beta signaling pathway amir04510   Focal adhesion amir04512   ECM-receptor interaction amir04518   Integrin signaling amir04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:amir00001]  09130 Environmental Information Processing   09132 Signal transduction    04350 TGF-beta signaling pathway     142941603 (thbs1b)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     142941603 (thbs1b)    04518 Integrin signaling     142941603 (thbs1b)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagocytosis     142941603 (thbs1b)    04148 Efferocytosis     142941603 (thbs1b)   09143 Cell growth and death    04115 p53 signaling pathway     142941603 (thbs1b)   09144 Cellular community - eukaryotes    04510 Focal adhesion     142941603 (thbs1b)   09142 Cell motility    04820 Cytoskeleton in muscle cells     142941603 (thbs1b)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:amir04131]     142941603 (thbs1b)   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:amir00536]     142941603 (thbs1b) Membrane trafficking [BR:amir04131]  Endocytosis   Phagocytosis    Opsonins     142941603 (thbs1b) Glycosaminoglycan binding proteins [BR:amir00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    142941603 (thbs1b) SSDB OrthologParalogGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C VWC2L_2nd EGF_3 TSP1_ADAMTS Laminin_G_3 cEGF EGF TSP1_CCN Motif Other DBs NCBI-GeneID:  142941603 NCBI-ProteinID:  XP_075939694 LinkDB All DBs Position Unknown AA seq 1164 aa AA seqDB search MKLTGIFLLLMLWTCESARVAESRDDNSVFDLFEHVQVPKKNHGVTLVKGDDPYSPAYKI LNPDLIPPVSESAFRDLIDSIHAERGFLLLLNFKQSKRTRGSLLTVEKRDGSGPVFEIVS NGKANTLDIVFSTENKQQVVSIEDVDLATGHWKNITLFVQEDRAQLYAGCEEVNTAELDA PIQSILTLETPASAQLRIGKGAVRDRFMGVLQNVRFVFGASLEAVLRNKGCQTSTTDSMI LESLNGSSAIRTEYTGHKTKDLQMVCGFSCEDLVSMFKELKGLGVVVKELSSELRQMTDE NKLIKNRIGVCLHNGIVHKNRDEWTVDDCTECTCQNSATVCRKISCPLIPCANATVPDGE CCPRCGTPSDYAEDGWSPWSEWTHCSVSCGRGIQQRGRSCDRINNNCEGTSVQTRDCYLQ ECDKRFKQDGSWSYWSPWSSCSVTCGAGVITRIRLCNSPTPQLGGKDCEGEGRQTKKCQK SPCPINGNWGPWSPWDTCTLSCGTGVQTRKRLCNDPAAKYGGKECVGNAKDTQICNKKAC PIDGCLSNPCFAGAKCISFPDGSWKCGKCPAGYTGNGIKCKDVDECKEVPDACFVFNGVH RCENTDPGYNCLPCPPRYSGPQAFGRGVEQAAAKKQVCTARNPCLDGSHDCNKNARCNYL GHFADPMYRCECRPGYAGNGHICGEDTDLDGWPNANLVCVENATYHCKKDNCPNLPNSGQ EDHDKDGIGDACDNDDDNDSIPDDRDNCPFVYNPRQYDYDRDDVGDRCDNCPYNSNPDQT DTDNNGEGDACAVDIDGDGILNEKDNCPYVYNVDQRDTDLDGVGDMCDNCPLEHNPDQVD SDDDRVGDKCDSNQDIDEDGHQNNLDNCPYIPNANQADHDKDGKGDACDHDDDNDGIPDD KDNCRLVFNPDQLDADGDGRGDACKDDFDQDNVPDIYDVCPENFDISETDFRQFQMVPLD PKGTSQIDPNWVVRHQGKELVQTVNCDPGIAVGYHEFNSVDFSGTFFINTERDDDYAGFV FGYQSSSRFYVVMWKQITQTYWSNKPTKAQGYSGLSIKMVNSTTGPGEHLRNALWHTGNT PGQVRTLWHDPKNVGWKDFTAYRWHLIHRPRTGLIRVVMYEGKKIMADSGNIYDKTYAGG RLGLFVFSQEMVYFSDLKYECRDV NT seq 3495 nt NT seq  +upstreamnt  +downstreamnt atgaagttgacaggaatatttttgctattgatgctttggacctgcgagagtgcgcgagtc gcagagagtcgagacgacaatagcgtgtttgacttgtttgagcacgtccaagtcccgaag aagaaccacggggtcaccctggtgaaaggagacgacccgtacagccccgcctacaagatc ctcaacccggacctgatccccccggtctccgagagcgcctttcgggacctgatcgattcc atccacgccgagaggggattcctcctgctgctcaacttcaagcagtccaaacggacccgg ggcagcctcctgaccgtggagaagcgggacggctccggacccgtgttcgagatcgtctcc aacgggaaggcgaacaccttggacatagttttctccaccgagaacaagcagcaggtggtt tccatcgaagatgtggatctggctactggccactggaagaatatcacgctgttcgtgcag gaggaccgggcgcagctgtacgcgggatgcgaggaggtgaacaccgccgagctggatgcg cccatccagagcatcctgacgctggagaccccagccagcgcgcagctcaggatcggcaag ggagccgtgagggacaggttcatgggggttctgcaaaacgtgaggtttgtgtttggagca tcactggaggccgtcctccgcaacaaaggatgccaaacctcgacgactgactccatgatc ctggagagcctcaatggctcctcagccatcagaacagaatacactggacacaagactaaa gacctgcagatggtctgtggcttctcctgtgaggacctggtcagcatgtttaaggagctg aagggcctcggtgtggtggtcaaggagctgtccagtgaactccgccagatgacggatgag aacaagctgattaagaaccgcatcggcgtctgcctccacaacggcattgtgcacaagaac agagacgagtggaccgtcgatgactgcaccgagtgcacttgtcagaactctgctactgtg tgccgcaagatctcctgccccctgatcccctgtgctaatgctactgttcctgatggggaa tgctgcccacgctgtggaacaccgagcgactatgcagaagacggctggtcgccgtggtct gaatggacccattgttccgtgtcgtgtgggcggggcatccagcagcgcgggcgctcttgc gaccgtatcaataacaactgcgagggcacctctgtgcagacccgcgactgctacctccag gagtgcgacaagcgattcaagcaggacggcagctggagctattggtcaccctggtcatcc tgctccgtcacctgtggtgctggtgtcataacccgtatccgcctctgcaactcccccacc cctcagcttggaggcaaggactgtgagggagagggccggcaaaccaagaagtgtcagaaa tctccgtgccccatcaatggcaactggggaccctggtcaccatgggatacctgcactctt tcctgtggaactggtgtccaaactcgtaaacgcttgtgcaacgaccccgcagcgaaatac ggtggcaaagagtgtgtcggtaatgccaaagacacccagatatgcaacaagaaagcctgt ccaattgatgggtgtctgtctaacccttgctttgctggagccaagtgcatcagtttccct gatggttcctggaagtgtggaaagtgtccagctggctacactggcaatggtatcaagtgt aaagatgtagatgagtgcaaggaggtcccagatgcttgctttgtgttcaatggtgtgcac cgctgtgagaacaccgatcctggctacaactgtctgccctgccctcctcgttactctgga ccccaagcgttcggcagaggtgtggagcaggctgccgctaagaaacaggtttgcacggct cgtaatccctgcctcgatggaagccatgactgcaacaaaaacgcccgctgtaactacctc ggacactttgccgatcccatgtaccgctgcgagtgcaggccaggctatgctggcaacggc catatctgtggagaagacaccgatctggatggatggcccaatgctaacttggtttgtgtg gagaacgccacctaccactgcaaaaaggacaactgtcccaacctccccaactctggacag gaagatcacgataaggacggcattggagatgcttgtgacaatgatgatgacaatgatagc attcctgatgatagggacaactgtccattcgtgtacaaccccaggcagtatgactacgac cgcgatgacgtgggtgaccgctgtgataactgcccctacaatagtaacccagaccaaaca gacacagacaacaatggagagggagacgcctgcgctgtggacattgatggagatggcata ctgaatgaaaaggacaactgcccctatgtgtacaatgtcgaccaaagagacacagatctg gacggagtgggagacatgtgcgataactgcccgctggaacataatcctgatcaggtggat tcagatgatgaccgcgtgggagacaagtgtgacagcaaccaggacatcgatgaagacgga caccagaacaacctggacaactgtccgtacatccctaatgccaaccaggctgaccatgac aaggatggcaagggagacgcctgtgaccacgatgacgacaacgacggcatccccgacgac aaggacaactgcagactggtcttcaaccctgaccagctggacgctgatggtgatggccgt ggagatgcttgcaaagacgactttgaccaagacaacgttcctgacatctacgacgtgtgc ccagagaacttcgacattagtgagacggacttccgccagttccagatggttcctcttgac cctaaaggcacctcgcagattgatcctaactgggtcgtccgccatcagggcaaagagctg gtgcagactgtcaactgcgaccctggcatcgctgttggttaccacgagttcaattcagtg gacttcagtgggactttcttcatcaacacagagagggatgatgattacgccggctttgtg ttcggctaccagtccagttcccggttctacgtggtgatgtggaagcagattacgcagaca tactggtcgaacaaacccaccaaggcccagggctactcaggcttgtctattaaaatggtt aactccaccactggcccaggagagcacctcaggaacgccctctggcacacaggaaatact ccaggacaggtccgcactctctggcatgaccctaagaacgttggatggaaagacttcacc gcctacagatggcatctgatccacagaccgagaacaggactcattagagttgtgatgtac gagggcaagaagatcatggcagattctggtaacatctatgacaagacatatgccggcggc aggctaggtctttttgtcttctcacaagagatggtatacttctcagacctcaagtatgaa tgcagagatgtttaa

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