Alligator mississippiensis (American alligator): 102557839
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Entry
102557839 CDS
T03087
Symbol
TLR8
Name
(RefSeq) toll like receptor 8
KO
K10170
toll-like receptor 8
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
102557839 (TLR8)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
amj04054
]
102557839 (TLR8)
04090 CD molecules [BR:
amj04090
]
102557839 (TLR8)
Pattern recognition receptors [BR:
amj04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
102557839 (TLR8)
CD molecules [BR:
amj04090
]
Proteins
102557839 (TLR8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR
LRR_5
TIR_2
LRR_12
LRR_NXF1-5
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
102557839
NCBI-ProteinID:
XP_014463251
LinkDB
All DBs
Position
Un
AA seq
1049 aa
AA seq
DB search
MNPPIRSLLCLLLLAYSTSGVLPETKYPRTLPCDVTKNNSSVTFDCSSRQLKYVPPGTYS
DVTEINLSGNFIKKISKESFQGLNNLMKINLNKNHYSKAMEKAVDPCEKGMVIEDGAFAN
MTKLMELLADETHLCKIPAGMPLSLTSLSLRFNGLFSLSQQNFSELMQLKELYLDRNCFT
GYSCERPFLAEPTAFSGLSALTVLSLSLNNLSQVPSQLPSSLKELYLSSNKIKTVNHYDF
QNLSNIEVLDLSGNCPRCFNAPFPCDPCPGDSSIQIHPLAFQYLANLRNLSLSCTSLTHI
PSSWFYNTSQLKVLNLGFNYLLKEIALGEFLVQLPHLEVLDLSFNYARQAYPKYINISDN
FANLVRLQQLHIRGYVFQDLTHEHLQPLIKLTNLHTLNFGVNFIKQIDLRVFQLFVNLTL
ISLSNNRISPLSEGSNNSDIHGTSLGNHVIRHRSTDTYLDPSANNMLESGGTSSSYKSAP
IFPLIRPQCSMYGKALDLSLNSVFFIAQQQFKGFHDVACLNLSSNGIGQALNGTEFIFLP
NLKYLDLSFNKLDLAYSYAFHELQNLEVLDLSYNKHYFIVSGITHRLVFLQNLMHLKVLN
LSYNEISTLTEPKLISSSLEELVFKGNRLDILWKNGDKRYRCFFKELSKLTHLDISFNRL
KSIPKKAFHCLPQSLIELRINNNELQHFDWKALKQFQNLKLLDVSRNLLSFINDSLASCT
SSLQTLLLQYNKIAQLPDGFLFKASSLLHLDVGYNRLHSINQSTFLSNDLNYLVLLNLKG
NPFECTCAIVGFINWIHLNINVSIPRLATDVICATPGDQTGNSIISLDRHTCTLDIAALI
CFSLSFIIIFTVMVMAITKHLFYWDAWYTYYYCAARLKGYRSIITEKALYDAYIAYDTKD
VAVTDWVINELRIHLEESKDKQVLLCLEERDWEPGKAVIDNLAQSIQCSRKTIFVLTERY
VKNGNFRTAFYIALQRLMDENLDVIVFILLEPVLQHSQYLRLRRRICRSSILEWPKNPQA
QCLFWQSLKNVLLTENYNRYNRLYTDSIK
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccccaattcgaagtttgttatgcctacttcttctggcctacagtacttcaggt
gtccttcctgagaccaagtaccctagaacactgccatgtgatgtgacaaagaataattcc
tctgtgacttttgactgcagttcccgtcaattgaaatatgtgcctcctggaacgtatagt
gatgtaacagaaatcaacctctcaggcaactttataaagaagatttctaaagaatctttt
cagggcctgaataacctgatgaaaataaatctaaacaagaatcattattcaaaggccatg
gaaaaggctgttgatccatgtgaaaaaggaatggtaattgaagatggagcttttgctaac
atgaccaagctgatggaattattagcagatgaaacccatttatgtaaaataccagctggg
atgccattgtccttaacatcactgagtttgagatttaatggcttattttctctcagccag
caaaatttttcagaactcatgcaactgaaagagctctacttggatagaaactgttttacc
ggctattcctgtgaaagacctttcctcgcagaacccacggctttttcaggcctctctgct
ttgactgtgctgtcactctctctcaacaacctatcccaagttccaagccagctaccctca
tcactaaaagaactttatctcagcagcaataagataaaaacggttaatcattatgatttt
caaaacctgtccaacatagaagtccttgacctaagtggaaactgcccaaggtgcttcaat
gccccttttccatgtgatccttgccctggagattcctccattcaaatacaccctcttgct
ttccagtatctggcaaacttacggaacctaagtctctcctgtacttccctcactcatata
ccttccagctggttttataacacgtcacagttaaaggttttgaatcttggttttaactac
ttgctaaaggaaatagctttaggggaatttttagtccaactacctcacttggaggtgctt
gacttatcctttaattatgcaagacaagcataccccaagtatataaatatttctgacaat
tttgctaacttggtccgtctccaacaactgcatatacgaggttatgtattccaggacctt
acacatgaacacctgcagcctcttataaaacttacaaatctacacaccctcaattttggg
gtcaactttatcaagcagattgacctcagggtattccagctctttgttaatctgactttg
atttctttgtccaacaacagaatatcaccattatcagagggcagcaacaacagtgacatt
catgggacatcattaggaaatcatgtcattcgacatcgttcaacagatacttatcttgac
ccatcagcaaataatatgctagagtctggaggtacatccagtagttataagtctgctcct
atttttcctttaatcagacctcagtgcagcatgtatggtaaagcactagatttaagtttg
aacagtgttttcttcattgctcaacaacaatttaaaggtttccatgatgtagcctgtttg
aatttgtcttcaaatggcattggccaagctttgaatggcactgaatttatcttcctccct
aatctcaaatatttagatttgtcttttaataaacttgatttggcttatagttatgcattt
catgaattacagaatttagaggtactggacctcagctataataaacactattttattgtg
tcagggataacccatagactggtatttcttcaaaatcttatgcatctaaaagttttaaac
ttaagttacaatgaaatttccacactaacagaacctaaactaatcagcagttcactggaa
gaattggtgttcaaaggaaatcgccttgatattttatggaaaaatggagacaaaagatat
agatgcttttttaaagaactcagcaaactaactcatcttgatatatccttcaacagactt
aaaagtattcctaaaaaggcattccattgtcttccacagagcctaattgaactacgcata
aacaataatgaattacagcactttgactggaaagccctgaaacaatttcagaatctcaaa
ttactagatgtgagcagaaatttattgtcttttataaatgacagccttgccagctgcaca
tcctctcttcagacacttctgcttcaatataataagattgctcagctacctgatggattt
ctttttaaagccagcagccttttacatctggatgtaggttacaacagacttcattccata
aaccaatcaacatttctgtcaaatgatttaaattatttagtcttgttgaacttaaagggg
aacccttttgaatgcacttgtgcaattgttggtttcattaactggatacatttaaacatt
aatgtcagcataccgcgactggcaacagatgtcatttgtgcaacacctggagatcaaaca
ggaaacagcattataagtttagatcgacatacctgtactttggatatagctgcactaata
tgcttttcgttatcattcattattattttcactgttatggtaatggctatcacaaaacat
ttattttattgggatgcttggtacacatattattattgtgctgccagactgaaagggtac
aggtccataatcacagaaaaagctctttatgatgcttacattgcctatgatactaaggat
gtagcggtaactgactgggtaataaatgaattacgaattcacttagaagaaagtaaggac
aagcaagttctgctttgtttggaggaaagagactgggagccgggaaaagccgtcattgac
aaccttgcacagagcatccagtgcagcaggaagacaatatttgtcctgacagaaaggtat
gtaaagaatgggaacttcagaacagctttttacattgccctgcagagactaatggatgag
aacctggacgtgattgtgtttattctgctggagccagtgttacagcactcccagtatctg
cgactgaggaggaggatttgcaggagttcaattcttgagtggccaaagaatccacaagct
caatgccttttctggcagagcctaaaaaatgtgttgctcacagaaaattataaccggtat
aacagactgtacacagactccattaaatga
DBGET
integrated database retrieval system
