Alligator mississippiensis (American alligator): 102560235
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Entry
102560235 CDS
T03087
Symbol
NUP210
Name
(RefSeq) nucleoporin 210
KO
K14314
nuclear pore complex protein Nup210
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102560235 (NUP210)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amj03019
]
102560235 (NUP210)
Messenger RNA biogenesis [BR:
amj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
102560235 (NUP210)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_NUP210_3rd
Ig_NUP210_15th
Ig_NUP210_2nd
Ig_NUP210_4th
Ig_NUP210_7th
Ig_NUP210_1st
Ig_NUP210_9th
Ig_NUP210_6th
NUP210_Ig
Big_2
AlphaC_N
PQQ
Motif
Other DBs
NCBI-GeneID:
102560235
NCBI-ProteinID:
XP_019350946
LinkDB
All DBs
Position
Un
AA seq
1929 aa
AA seq
DB search
MAIFKVTETEHFSDSYHQYHAHLPACVCLDGYLDRTESLRTTGLLQSQKKKPILVRVLGN
HLYQSGQVLASASKLNIPKVLLPFARGTRTNFTLEASEGCYRWSSTRPEVASIEPTDQNE
LQCSQKAVVQARSSQPTRLTSIIFAEDIMTGQVLRCDAIVDIIHGIQIVSTTRELYLEDS
PLELKIQALDSEGNTFSTLAGLAFDWTIVKDTEASGFSDSHNALRILKFLESTYIPPSYI
SEMEKVAKQGDTILVSGIKTGSSKLKARIQENVYKNVQPAEVRLLILENILLNPASDIYL
LVGTSVQYKVQKIRQGKIAELMMPSDQYELQLQNNILGPEGDSTRPVAKLDQATSTVTAL
QQGQTNLVLGHKSIRLQGASRLPNCTIYVVDPGYLGFTIHPGDRWVLETGRLYEITIEVY
DRSSNKMYLSDNIRINTELSKEYFEVLKSSLNGSYHYVKAIKKGQTIIDAALTSVVDQDG
GVHTLPVPVRNQQEVEIYVPIVLSPSILTFPWQPKAGAYQYTIKAHGGSGNFSWSYSNQA
VATVTVKGVMTTGSDIGVSIIQANDVQNPLHYGEMKVYVTEPSGMEFTPCQVEARVGQIL
ELPLRINGLMNVETSEMVTLSDCSHFDLVVEVDNRGVFKPLQGRLKPLSDYCSGVRVKAE
AQGYTTLVVSYTHGHVHLSASITIAAYLPLKTIDPPSVALVTLGSSKDMLFEGGPRPWVQ
EPSKFFRNITAEDAGSISLSLFGPPTSRNHFQHWVRVFCKSLGEQVITLTVGNKPTITNP
FPAVEPAFVKLICTAPSRLTLTPVYANPQLDLSCPLLQQNKQVVPVSNYRNPVLDLAVYD
QQGIKFDNFSSLAIIWESTKFSLASIEPSMPLELQLKEDGIGQKKMHGLQTVLVHHESGT
TAVSATATGYQQSHLKAAKVNIPYEPLMPVSATIELILVEDVKVSPRDVTIYNHPDVKAE
LLIKEGSGYFFINTSAINIVKVAYDEARSVALVHPLLPGSVTVMIHDLCLTFPAPAKAEM
YVSDILELYVRVVDKVEIGKTVKASVRVLDDSKKPFLAKYLAFMDLKLRAASQIVSLVPI
NEALDDYTAAFLVHGVAIGQTSLMATVTDKNGQRINSALQQIEVFPPFRLLPRKITLIIG
AMIQITSEGGPQPQSNIIFAVSDETIASVNSAGLVKGAAVGNGTVTGVVQAVDAETGKVV
VVSQDKVEVEVVQLQAIRVHAPITRMKTGTQMPVYVMGITSNQTPFSFGNAVPGLTFHWS
VTKRDILDIKTRHNEASFQLPAKYNFAMDVYGKVKGRTGLKVVVKALDPSAGQFYNMERE
LSDEVQIQVFEKLCLVTPDVKAEQILMSPNSFIKLQTNRDRVASLSYRVLDGPDKVPLVQ
IDESGFLNSGSLIGSSTIEVISQEPFGINQTIVVAVKVYPVSYLRISTSPVLHTQNKEAM
LALPLGVTLSFTVHFHDNSGDTFHAHNSVLHFATNRDDFVQIGKGATNNTFVIRTVNVGL
TLLMVWDAEHSGIADYVPLPVQHAIFPELVDVVVGDVICLSTSLINQEGLPGVWISSSNS
VLQVDAKTGAAVARDSGVVSVYYEIPGLLKTYREILITIPQRTVAMHVSGVKTSLQGVVA
SKVIVAVGERSRNLKGECSPAQIEAIAELQPESIISCHLHFNNAAFDFPAHDIFTAEPGF
DSALGQYICSITMHRLTDKQLKHLSMSKTALIVTASIQSSHFSGEQISTEVPFNPGFYAD
QTEIVLSNHYISSDVKIFGATEILNNLEVKCGSPMVKAFEREKSYGLPSYVTYTVSLSDP
RVTSEGSLSTTLTISSTVTDQSITIPVTIIYITGRSGPVRHGASLFQHFLDSYQVMFFTL
FALLAGTAVMIIAYHAVFSPKEQHTHPAFTPRTTPQHSHNSFSASQASPFSPVSSNRKSS
PSSILWSTS
NT seq
5790 nt
NT seq
+upstream
nt +downstream
nt
atggctatatttaaggttactgaaactgagcacttttctgactcttatcaccaatatcat
gctcacttgcctgcttgcgtgtgtctcgatggctatctagacagaacagagtcactgagg
actactggacttcttcagtctcagaaaaagaaacctatattagttcgtgttttgggtaac
catctctaccaatcaggacaagtcctggcctcggcttccaagctgaacatccccaaggtg
ctgctgcccttcgcgcgcggcaccaggaccaacttcacgctggaggccagcgagggctgc
taccgctggtcatccaccaggccggaggttgctagcatagaacctacagatcaaaatgaa
ctccagtgttcccaaaaggctgttgtccaggcacgttcatcacagccaacacgtctgaca
agtataatttttgctgaagatataatgactggtcaagttcttcgttgtgatgctatagtt
gacataattcatggcatccaaattgtgtccacaacaagagaactttacttggaagattca
ccactggaactgaaaattcaggctttagattctgaaggaaacacttttagcactttggca
ggattagcctttgactggacaatagtaaaagacacagaggccagtggcttctcagattcc
cacaatgcattgcgcatactcaagttcttagaatcaacttacataccaccttcctatata
tcagagatggaaaaagtcgccaaacaaggagacacgattctagtatctggaataaaaacg
ggaagttccaaattaaaagcaagaatacaggaaaatgtctacaagaatgtacagcctgct
gaagtcagattgcttattttggaaaacatccttttaaatccagcttctgatatttacctg
ctggtaggaacatcagttcaatataaagttcagaaaataagacaaggcaaaattgcagaa
ttaatgatgccgtctgatcagtacgagctgcagcttcagaacaacatactgggccctgag
ggagattcaactcggcctgttgccaagttggatcaggcaacatcaactgtaactgcattg
cagcagggacaaactaacctcgtgctggggcacaaaagtattcgcctgcagggtgcctcc
aggttacccaactgcactatctatgttgtggatcctgggtatttagggtttacaattcat
cctggtgacagatgggtcctggaaacaggcagactgtatgaaattacaattgaagtgtat
gatagatcaagcaataaaatgtatttgtctgataatatcaggattaatacagagctatcc
aaagaatattttgaggttctgaaatcctctttgaatggatcatatcattatgtgaaagca
ataaagaagggtcaaactattattgatgctgctttaacatctgtggtagatcaggatggg
ggtgttcatacactgcctgttccagtgcgaaaccagcaggaagttgaaatttatgttccc
attgtcctttcaccaagcattttgacatttccatggcagccaaaggcaggagcctatcag
tatacaataaaggctcatggtggaagtggaaacttcagttggtcttattctaaccaagct
gttgctacagtaacagtcaaaggagtaatgacaactgggagtgacattggtgtcagtatt
atacaggcaaatgatgttcagaacccactacactatggagaaatgaaggtatatgtaact
gaacctagtggcatggagttcacaccatgtcaagttgaggcacgtgttggtcagatattg
gagctacccctgaggattaatggtctaatgaatgttgaaaccagtgagatggtcacactg
agcgattgttcgcattttgatttagttgtggaggtagacaaccgtggtgtgttcaaaccg
cttcaagggagactgaagccactttctgactattgcagtggagtcagagtgaaagctgaa
gctcaaggatatacaacgcttgtggttagttatactcatggtcatgtccaccttagtgct
agcatcacgattgctgcttatctgccactaaaaactattgatcctccttcagttgcctta
gtaacattgggttcttctaaagacatgttatttgaaggtggacccagaccatgggtgcaa
gaaccttcaaaattcttcaggaacatcactgctgaagatgcaggaagcattagtttatcc
ttattcgggcctcctacatctcgaaatcatttccagcattgggttagagtattttgcaaa
agtctaggagaacaagttattaccttaacagttggaaataagcccaccattaccaacccc
ttcccagctgttgaacctgcttttgtgaagcttatttgcactgccccttctcgactcact
ttgactccagtttatgcaaatcctcagcttgatctttcctgccctttgctgcaacagaat
aagcaagtggttcctgtttcaaattatcgcaatccagtattggatttagctgtttatgac
caacaggggattaaatttgataacttcagctcacttgctataatctgggaatcaacaaaa
ttttccttggccagcattgaacccagcatgccattggagctgcaactgaaagaggatgga
attggtcagaagaaaatgcatggtttgcaaactgtccttgttcatcatgagtctggaaca
actgctgtctctgctactgcaacaggataccaacagtctcatctcaaggcagctaaagtg
aacataccgtatgaacctcttatgcctgtgtctgccactattgagctgatacttgtagaa
gatgtgaaagttagtcctagagatgtcacaatttacaatcaccctgatgtcaaggcagag
ctactcatcaaagagggttctgggtattttttcataaacaccagtgctataaacattgta
aaagtggcttatgatgaggctcgaagtgttgctttggtgcatcctttacttccaggatca
gtaactgtaatgattcatgacttatgtctaacttttcctgccccagccaaagctgaaatg
tatgtatctgatatactagagctgtacgtccgagttgttgacaaggtggagattggaaaa
acagttaaagcttctgtcagagtattggatgactccaagaaaccttttttggctaaatat
ctcgcattcatggatttaaaactaagggcagcatctcaaattgtttcactggtcccaatc
aatgaagctcttgatgactacactgctgctttcctagttcatggtgtagccattggtcaa
accagtcttatggcgacagtcactgataaaaatggacaaagaatcaactctgctctgcaa
cagattgaagtctttcctccatttagattactaccaagaaaaattaccctgatcatagga
gcaatgattcagattacttcagaagggggcccacaaccgcagtccaacataatttttgct
gtcagtgatgaaacaattgcatcggtgaacagcgcaggccttgtgaaaggagcagcagtt
ggcaatgggacagtaacaggagtggtacaagctgttgatgcagagaccgggaaagttgtt
gtggtttctcaggataaagtggaagttgaagtagtacagcttcaggctattagagtccat
gctcccattacacgaatgaaaactggtacccagatgccagtttatgtgatgggcatcacc
agtaatcagacccctttctcatttggcaatgctgtgccagggttaacattccattggtct
gtcaccaagagggacatcttggatatcaagacaagacacaatgaggcttcatttcagctt
ccagcaaaatataacttcgctatggatgtttatggtaaagtgaagggaaggacaggcctg
aaagttgttgttaaagcccttgatccttcagctggacagttttacaacatggaaagggag
ctatcagatgaagtccaaattcaggtatttgaaaaactttgtctagttactccagatgtc
aaagcagaacagatcttaatgtcaccaaattcatttattaaacttcaaacaaatagggac
agagtggcttccctgagttaccgtgtgctggatggtcctgataaagttccgcttgtgcag
attgatgagagtggctttcttaactctggatctttgataggatcatcaacaattgaagta
atttcacaagagccatttggaatcaaccagaccattgtagttgctgttaaggtttatcct
gtttcctacttaagaatctctacaagtcctgttttgcacacacaaaacaaggaggctatg
ttggctctaccactaggtgtgacattaagcttcactgtccattttcatgataactctgga
gataccttccatgcacacaattctgtgctccactttgcaaccaacagagatgattttgtg
cagattgggaaaggagccacaaacaacacgtttgtaatccgaacagtaaatgttggcttg
accttgcttatggtttgggatgcagagcacagtggaattgcagactatgtcccccttcca
gtgcaacatgccattttccctgagcttgtggatgtggtagtaggtgatgtcatctgtttg
agtacttcattgatcaaccaagaaggtctaccaggagtatggatctcttcatcaaacagt
gttcttcaagttgatgcgaagactggtgcagctgtggcaagagattcgggagttgtcagt
gtttattatgagattcctggactacttaaaacgtacagggagatattgattactatacct
caaaggactgtagcgatgcatgtaagtggagtgaaaacaagcttacaaggagttgtggct
tcaaaagtcatagtcgcagttggggaaagaagcagaaatttgaaaggggaatgttcacct
gctcagattgaagccattgcagaactacagccagagtccattatcagctgccatcttcat
tttaacaatgctgcatttgatttcccagcccatgatatttttacagcagagcctggattt
gatagtgctttgggtcagtatatctgttccatcacaatgcacagacttactgacaagcag
ctaaagcatctcagcatgagtaaaacagctctcatagttacagcctcaattcagagcagc
catttctctggtgagcagatcagcactgaagtgccattcaatccaggattttatgctgat
cagactgaaatagtcttaagtaaccattatattagctctgatgtgaaaatatttggagcc
actgaaattctcaacaatctggaggtgaaatgtggatctccaatggtgaaggcatttgag
agagagaaatcatatggcctgcccagttatgtaacctacactgttagtttatctgatcca
agagttacaagcgaggggtccttatcaaccacgcttacgatatctagcacagtgactgac
cagtctattactattccagtgacaattatttatataactggcagaagtgggccagtgaga
catggagccagcttattccaacacttccttgattcctatcaagtaatgttcttcacgctt
tttgcactgctagcagggacagctgttatgatcatagcataccatgcagtattctcaccg
aaggaacagcatactcatccagcattcaccccaaggacaactcctcaacacagccataac
agtttttctgcttcacaggcaagtcctttcagtcctgtgtcttcaaatagaaaaagcagc
ccttcctccatcctatggagtacttcttag
DBGET
integrated database retrieval system
