KEGG   Alligator mississippiensis (American alligator): 102560297
Entry
102560297         CDS       T03087                                 
Name
(RefSeq) DLA class II histocompatibility antigen, DR-1 beta chain-like
  KO
K06752  MHC class II antigen
Organism
amj  Alligator mississippiensis (American alligator)
Pathway
amj04145  Phagosome
amj04514  Cell adhesion molecules
amj04672  Intestinal immune network for IgA production
amj05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:amj00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    102560297
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    102560297
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    102560297
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    102560297
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:amj04147]
    102560297
Exosome [BR:amj04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   102560297
  Exosomal proteins of epithelial cells
   102560297
  Exosomal proteins of breast milk
   102560297
SSDB
Motif
Pfam: C1-set Ig_2 Ig_3 ig C2-set_2 Marek_A Psg1 C2-set_3 DUF1056
Other DBs
NCBI-GeneID: 102560297
NCBI-ProteinID: XP_014461769
LinkDB
Position
Un
AA seq 155 aa
MDSVSPSLSLSVKPKVKVSPTKSGAQAHPDTLICSMMGFYPGGIKVKWLKNGQEHTPGVV
STELMQNGDWTFQILVMLEMTPQEQXDVYTCQVEHSSLPGPITVLWEAQSDSARSKMLTV
VGGFVLGLIFLALGLLVYLRNKKGRPVPQPTGLLS
NT seq 468 nt   +upstreamnt  +downstreamnt
atggactcagtctctccatctctttccctctcagtgaagcctaaggtgaaagtctcccca
acaaaatcaggggcccaggcccacccagacacattgatttgctccatgatggggttttac
cccggcgggatcaaggtgaaatggttgaagaacgggcaggagcacactcccggagtggtg
tccacggagctgatgcagaacggagactggaccttccagatcctggtgatgctggaaatg
accccccaagagcagnnggacgtctacacctgccaggtggagcacagcagtctgccgggc
cccatcactgtgctctgggaggcgcagtcagactcggccaggagcaagatgctgacggtg
gttgggggctttgtgctggggctgatcttcctggcgctgggactcctcgtctacctgagg
aacaagaaaggccgccccgttccccagccaacagggctcctcagttag

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