KEGG   Alligator mississippiensis (American alligator): 102561708
Entry
102561708         CDS       T03087                                 
Name
(RefSeq) DLA class II histocompatibility antigen, DR-1 beta chain
  KO
K06752  MHC class II antigen
Organism
amj  Alligator mississippiensis (American alligator)
Pathway
amj04145  Phagosome
amj04514  Cell adhesion molecules
amj04672  Intestinal immune network for IgA production
amj05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:amj00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    102561708
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    102561708
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    102561708
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    102561708
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:amj04147]
    102561708
Exosome [BR:amj04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   102561708
  Exosomal proteins of epithelial cells
   102561708
  Exosomal proteins of breast milk
   102561708
SSDB
Motif
Pfam: MHC_II_beta MHC_I TPR_27
Other DBs
NCBI-GeneID: 102561708
NCBI-ProteinID: XP_019339292
LinkDB
Position
Un
AA seq 141 aa
MSGTSRGVSSVSCAAMGTGGMPGPRSRWAGAVLVALVVLGTHMAHCMEPPEHFLYQDKHE
CLYTNSTQRVRYVNRYVWNQQDYVHFDSDVGVFVADTELGEPTATCWNSQKEELEYRRGL
VDRFCRHNYGMFERGHVISRS
NT seq 424 nt   +upstreamnt  +downstreamnt
atgtcagggacatcgaggggtgtcagctctgtgtcctgcgcagcgatggggaccggtggg
atgccggggcccaggagccgctgggctggggctgtgctggtggcactggtggtgctggga
acccacatggctcattgcatggagcccccagagcatttcctgtaccaggacaagcacgag
tgtctctacaccaacagcacccagcgcgtgaggtatgtgaacaggtacgtctggaaccag
caggactatgttcacttcgacagtgacgtgggcgtgtttgtggctgacacggagctgggg
gagcctaccgccacgtgctggaacagccagaaggaggagctggagtacagacggggctta
gtggacaggttctgccgacacaactacgggatgtttgagcgaggccacgtgatcagccgc
agtg

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