KEGG   Alligator mississippiensis (American alligator): 102562567
Entry
102562567         CDS       T03087                                 
Name
(RefSeq) major histocompatibility complex class I-related gene protein
  KO
K06751  MHC class I antigen
Organism
amj  Alligator mississippiensis (American alligator)
Pathway
amj04144  Endocytosis
amj04145  Phagosome
amj04218  Cellular senescence
amj04514  Cell adhesion molecules
amj05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:amj00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    102562567
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    102562567
   04145 Phagosome
    102562567
  09143 Cell growth and death
   04218 Cellular senescence
    102562567
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    102562567
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:amj04147]
    102562567
   00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:amj00537]
    102562567
Exosome [BR:amj04147]
 Exosomal proteins
  Proteins found in most exosomes
   102562567
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:amj00537]
 Antigens
  102562567
SSDB
Motif
Pfam: MHC_I C1-set MHC_I_3 Ig_3 C2-set_3 ig DUF6346 Insulin_TMD Ig_2 Rv3627c_N I-set DUF7299 Marek_A MHC_II_alpha EphA2_TM
Other DBs
NCBI-GeneID: 102562567
NCBI-ProteinID: XP_014449214
LinkDB
Position
Un
AA seq 349 aa
MLLSLLLAGAVVVTGGSHSYQYFYTGLSDPDSGLPDFMAVSYVDNQEIFCYNSKMHREDR
CANWVQEAVDPDFWESEIRSLRGWQRGFRKNLVTLQHRYNQTSGSHTLQLMYGCELGEDD
STRGYMQFGYDGGDFISYDLSMRTWVAVVPQAQITQYILNEDNAALQLTRAYLKETCIKW
LKMYLEHGKAALQSKPPMAQVNDRSSRDGLATLSCRVHGFYPKDVAVVWLKNGEPQTQET
SRSGVVPSGDGTYQTWATIEIDPSSNHDYTCHVEHVSLGADLRVAWEKKPESSLMLIVGF
VIAVVLVLVVAGAAVFFCRRQGAGYKAASTRDGSNSSGECQRAGPTQGR
NT seq 1048 nt   +upstreamnt  +downstreamnt
atgctgctgagcctcctgctcgcgggggccgtggtcgtgaccggcggctcccactcctac
cagtatttctacacggggttgtcagatcccgactcaggcctgcctgacttcatggctgtg
agctacgtggacaaccaggaaattttctgctacaacagtaagatgcatagagaggacagg
tgtgcgaactgggtgcaggaggccgtcgacccagacttctgggaaagtgaaatcaggagc
ttgcggggctggcaacggggatttagaaagaacctggtcaccctgcagcatcgctacaac
cagacaagtgggtctcacactctccagctcatgtatggatgtgagcttggagaagatgac
agcactagagggtatatgcagtttggctatgatgggggagacttcatcagctatgacctg
agtatgcgaacctgggtagcggttgtaccacaggcccagatcactcagtacatattaaat
gaggataatgctgcccttcagcttacaagagcctatctgaaggagacctgcatcaagtgg
ctgaagatgtacctggagcacgggaaggcagcgctgcagagcaagcctcccatggctcag
gtgaatgacaggtcttcccgagatggacttgccaccctgtcctgccgggtccacggcttc
taccccaaggatgtggctgtcgtctggctgaagaacggggagccacagacccaggagacg
agccgctcaggggttgttcccagtggagacgggacttaccagacctgggccactattgag
atcgacccgagcagcaaccatgattacacctgccatgtggagcacgtgagcctgggtgca
gacctgagagtggcctgggagaaaaagcctgagtccagcctgatgctgatcgtgggcttt
gttatcgctgtcgtgctggtcttggtcgtggcaggcgcagctgttttcttctgcaggagg
cagggagcaggatacaaagcagcatccactcgtgacggctccaacagctccggtgagtgt
cagcgtgcgggaccaacccagggaaggg

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