Alligator mississippiensis (American alligator): 102564517
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Entry
102564517 CDS
T03087
Symbol
BBS10
Name
(RefSeq) Bardet-Biedl syndrome 10
KO
K19401
Bardet-Biedl syndrome 10 protein
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
amj03037
]
102564517 (BBS10)
Cilium and associated proteins [BR:
amj03037
]
Primary cilia and associated proteins
BBS-CCT complex
102564517 (BBS10)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
102564517
NCBI-ProteinID:
XP_006269968
LinkDB
All DBs
Position
Un
AA seq
713 aa
AA seq
DB search
GGHVLLARSTGEALLARDGGRVLQALSLESPTARVMVACACAHQAATGDGAKTFVIFLSS
LLQGLLMALGKGVAATASPIPRQGQRGNSCMGRKEIAQSLVAFQTRVLDQVVMQDLGKHF
LSAFPHLTAEIERPTLESIFEAYLCGRIGRTHLKFLSQLGCDYYYLCTPCETGSNETLNF
VNDCFMELHTAVTGLPVSSSRVLDGLVLQRDFVAYCPADGDIRMLIVTDSILPALSASGV
EFIVNTQVQYQASQAWISKRTEAVMKYLQNHKVKVLLSSAKQEEMVIYYAKLSGISVVHC
LSPEEVSLLCRITGISPFRYWDNIHSEITETATAKFCRPILLGSKRYVHLGFSGTSAFRP
HCVILCGPVHGVTEQHASAFHGAFKMLQLLFKAVDQTDRCKEKTEHPNKSSDALGCSCHS
ATPQKLKTEDVTHSSDKTTDQQLNVIRSERESQLTDSAMGTGENPAFVQKDLQKSLNLAV
PITEIENDKFPGLTNKTPFLGDTENLHLKYRHPSEIQVKGESKPVVSNQHICKVATTVAG
NTSAEVVPRHLRTIKDCWKESRELVPFEDESSYKSSVQNYSGLFIQAGSVLPVGGNFEIL
LHYYLCNYAKQCQQSKISIISTIIADALLSIPEILYRTGRGSGFPKFYLEAISALRNNQP
LPRPQKGLESVYCKYLLVVSVLHCVTKLLSVDLIIGIKRLPQITEANYSEEDL
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
ggcggccacgtgctgctggcccggtccacgggggaggcgctgctcgcgcgggacggcggc
cgcgtgctgcaggcgctgagcctcgagtcccccacggccagggtgatggtggcgtgcgcc
tgcgcacaccaggctgccactggtgatggcgccaagacgttcgtcatctttctctccagt
ctgctgcaaggccttctgatggctctcggcaagggggtggcagcaacggcatctcccatt
cctcggcaggggcagagagggaacagctgcatggggcggaaggaaatcgctcagtccctc
gtggcctttcagacccgagtactggaccaagtggtgatgcaggacctagggaagcacttc
ctgtctgctttccctcacctcacagctgagatcgagaggcctacgctggagtccatattt
gaagcttacttatgtggaaggataggaagaactcacttgaagtttctttcccagttgggc
tgcgattactattacctgtgcacgccgtgtgagacggggagcaatgaaacactgaatttc
gtgaatgactgcttcatggaattgcacactgctgtgacgggccttccggtttccagctcc
agggtcctggatggacttgttcttcagagagattttgttgcatactgtccagcagatggt
gacataagaatgttaatagtcacagactctatccttcctgctctttctgcctctggtgta
gagtttattgtgaatacgcaggttcagtatcaagcttctcaagcttggatttccaaaaga
acagaagctgtaatgaaatacttgcagaaccacaaggttaaggtgttactgtcaagtgcg
aagcaagaggaaatggttatttactatgcaaaactaagtggtatatctgtggtacattgt
ttatcaccagaagaagtctctcttctttgcaggattacaggaatctcaccattcagatat
tgggacaacatacatagtgagatcactgaaactgccacagcaaaattttgtcggcctatc
ctgcttggctccaagagatacgttcatcttggtttttcaggaacatctgcctttcggcct
cattgtgtaattctttgtggaccagtgcatggtgttacagagcagcatgcatctgctttt
catggagcatttaaaatgttacagctgctgtttaaagcagttgatcaaactgacagatgt
aaagagaaaactgaacacccaaataaatcttcagatgctttgggttgtagttgccattca
gctactccacagaaactcaaaacggaggatgttacgcatagcagtgacaagaccactgat
caacaactgaatgttattaggtctgaaagggaaagccagctgacagactctgccatgggg
acaggtgaaaatccagcatttgttcaaaaagatttgcagaaatccctaaaccttgctgtg
cccatcacagaaatagaaaatgataagtttccagggctcactaataaaactcctttttta
ggagacaccgagaacttgcatttgaaatatagacatccaagtgaaatacaggttaagggt
gaaagtaagccagttgtctctaaccaacacatttgtaaggttgccacaacagtggcagga
aataccagtgctgaagttgtacccagacatctgagaactattaaggactgctggaaagaa
agcagagagttagttccatttgaggatgagagcagttataaaagttctgttcaaaattat
tctggcttgttcatacaggcaggatcagtgttgccagtaggaggtaactttgagatctta
ctgcattattacctctgtaactatgcaaaacaatgtcagcaatcaaaaataagtattatt
tctactataattgctgatgcattgctaagcattccagaaatcctttacaggacagggaga
ggcagtggttttcctaagttctatcttgaagccatcagtgcactcagaaataatcagcca
ctgcccaggcctcaaaaaggcctagaatcagtgtactgtaaatacctgctggttgtttct
gttcttcattgtgttacaaagcttctgtctgttgacttgataattggtattaagagactg
cctcagataactgaggctaattattccgaagaagacttgtga
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