Alligator mississippiensis (American alligator): 102566882
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Entry
102566882 CDS
T03087
Symbol
TRAF3
Name
(RefSeq) TNF receptor associated factor 3
KO
K03174
TNF receptor-associated factor 3
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04620
Toll-like receptor signaling pathway
amj04621
NOD-like receptor signaling pathway
amj04622
RIG-I-like receptor signaling pathway
amj05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
102566882 (TRAF3)
04621 NOD-like receptor signaling pathway
102566882 (TRAF3)
04622 RIG-I-like receptor signaling pathway
102566882 (TRAF3)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
102566882 (TRAF3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF3_RING
CCDC18_1st
zf-C3HC4
Cast
ATG16
MPS2
Sina_ZnF
NOCA1_mid
Rod_CreS
CEP104_ZnF
Tropomyosin
ODF2_N
GAS
SPATA24
KxDL
T4SS_LegC2C7
BLOC1_2
SNARE
Motif
Other DBs
NCBI-GeneID:
102566882
NCBI-ProteinID:
XP_006276317
LinkDB
All DBs
Position
Un
AA seq
567 aa
AA seq
DB search
MDTSKKPDPPISVEMVQQRANPDRSPAASIYVPEQGGYKEKFVNVVEEKYKCEKCRLILC
NPKQTECGHRYCETCMNALLSSSTPKCAACQENIAKDKVFKDNCCRRELLALQIYCRNEN
KGCKEQLTLGQLLMHLKNDCQFEELSCPRADCKEKILRKDLPDHVEKTCKYRETTCKYCK
SQVAMITLQKHEDTDCPCVMVSCPHKCSVKTLMRSELNAHLSECINAPSTCSFKRYGCTF
QGTNQQIKAHEASSAVQHVNLLKEWSNALENKVAMLQNESLEKNKSIQTLHNQICSFEIE
IERQKEMLRNNESKILHLQRVIDSQAEKLKELDKEIRPFRQNWEEADSMKSSVESLQNRV
TELESVDKTTGQGARNTSLLETQLTRHDQMLSVHDIRLADMDLRFQVLETASYNGVLIWK
IRDYKRRKQEAVMGKTLSLYSQPFYTGYFGYKMCARVYLNGDGMGKGTHLSLFFVIMRGE
YDALLPWPFKQKVTLMLMDQGPSRRHLGDAFKPDPNSSSFKKPTGEMNIASGCPVFVAQT
VLENGTYIKDDTIFIKVIVDTSDLPDP
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggacaccagtaaaaaacctgacccccctatatcagtagaaatggtccaacaaagggca
aatcctgatcgtagccctgcagcatcgatttacgttccagaacaaggtggttacaaagag
aaatttgtaaatgtagtggaggagaagtacaaatgtgaaaagtgtcgcctcattttgtgc
aatcccaaacagactgaatgtggacacagatactgtgaaacctgcatgaatgccttgtta
agttcttctactccaaaatgtgcagcgtgtcaagaaaacatagctaaagacaaggtattt
aaggataattgctgtaggagggagcttcttgcccttcagatatattgcagaaatgaaaac
aagggctgcaaagaacaattaaccctgggccagttactgatgcatttgaaaaatgactgc
caattcgaagaactttcatgtcctcgtgctgattgtaaagaaaaaatactgagaaaagac
ttgccagaccatgtagaaaagacctgtaaatatcgagagacgacatgtaaatactgtaaa
agccaagttgcaatgattacattacagaaacatgaagatacagactgcccatgtgtcatg
gtttcatgtcctcataaatgtagtgttaagacactcatgagaagcgagttgaatgcacat
ttgtcagaatgtattaatgccccaagtacctgtagttttaagcgttatggctgcactttt
cagggaacaaatcagcaaattaaagcacatgaagccagctcggcagtgcagcatgttaac
ttattgaaagagtggagtaatgctctagaaaataaggttgccatgctccagaatgaaagt
ttggaaaagaacaagagtatacaaactttacataatcagatttgtagctttgaaatagaa
attgaaagacagaaggaaatgctgcggaataatgaatctaaaatacttcatttacagcga
gtgattgacagtcaagcagagaaattgaaagaactggacaaagaaatccgtcccttccga
cagaactgggaagaggctgacagcatgaagagcagtgtggagtcccttcagaacagagtg
acggagctggagagcgttgataaaaccacagggcaaggagcacgaaatactagtctgctg
gagacacagctaactcgacacgatcaaatgctgagtgttcatgatattcggctggctgac
atggaccttcgattccaagttttagaaactgccagttacaatggagtattaatttggaaa
attcgagattataaacgtcgaaagcaagaggccgtgatgggaaagacactgtccttgtac
agccagcccttttatactggatacttcggctataaaatgtgtgccagagtttaccttaat
ggtgatggcatgggaaaagggacgcacttgtcattgttttttgtcataatgcgtggagaa
tatgatgcattgcttccttggccattcaaacagaaagtgactctcatgctaatggatcaa
ggaccgtctcgccgtcacttaggagatgctttcaagccagacccaaacagcagtagtttc
aagaagcctactggagaaatgaacattgcatctggttgcccagtctttgtggctcaaact
gttctagaaaatggaacgtatattaaagatgatactatttttattaaagtcatagtggat
acatcggatctaccagacccctga
DBGET
integrated database retrieval system
