Alligator mississippiensis (American alligator): 102567363
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Entry
102567363 CDS
T03087
Symbol
PKP1
Name
(RefSeq) plakophilin 1
KO
K10387
plakophilin 1
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
amj04812
]
102567363 (PKP1)
Cytoskeleton proteins [BR:
amj04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
102567363 (PKP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Arm
V-ATPase_H_C
HEAT_2
Mo25
Motif
Other DBs
NCBI-GeneID:
102567363
NCBI-ProteinID:
XP_006262181
LinkDB
All DBs
Position
Un
AA seq
732 aa
AA seq
DB search
MLHSPLKTALAYECFQDQASSTLALPSDHKLKTRGTGKQRVQEQVMMTVKRQKQKSLSSS
MSHSNRGSMYEGLADGYAYGTGRGSYYAKNQTGNGTWGYPQLYNGTLKRDTENKRYSSYS
QMEGWGSKNYNKICNTPRAGSDYCFAQTMKTSRSEPDLCCEPPRGTLKRNQGYQAGHKAT
LNRQSIYSSYSTQQGTTRTNKKMAARALSCPSSNKQEVVYAEPRMSGKQEMAYTRSQSSS
KICSDEPDYGTMTIQKAIQFLCSSDEKHQAMGAYYLQHTCFQDESAKQEVYRLGGIAKLV
ELLRSTNQNVQQAAAGALRNTVFRNPVNKIETRRQNGIRESVSLLRRAGNTETQKQLTGL
LWNLSSTDELKEELIQEALPVLTDCVIVPFSGWSDGTSNRTRQIIDPEVFFNATGCLRNL
SSADMGRQTMRNYPGLVDSVMTYAQNCVAANRPDDKSVENCLCILHNLSYRLDAEVPNKY
TQLNHMARNASMDRSLTGCFNSRGGKLEEDEYNVPLPEEDYKPRGANWLYHSDAIRTYLS
LMDKSKKDSTLEACAGALQNLTASRGLMSNAMSQVIGLKEKGLPRIARLLQSNCSEVVRS
GTSLLSNMSRHPVLHKTMAHQVLPDVSRLLSFQSANTNTYGEIMSSACYTLRNLIMSNPH
LGKSYLTSNVMNNVLSLCRNGSCPKAAEAARLLLSDLWSNRELQSVLKQQGFDKNMMGSL
ASTTFRTLSSRF
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgcttcactccccactgaaaacagctctggcttatgagtgtttccaagaccaggctagt
tccacactggccttaccctcggatcacaagctgaaaactaggggcactggaaagcagagg
gtccaggagcaggtgatgatgacagtgaagcgtcagaagcaaaagtccttgtcatccagc
atgagccactccaaccgaggttccatgtatgagggtctggctgatggctatgcttatggg
acaggccggggcagctattatgccaaaaaccagacaggaaacggcacctggggatatccg
cagttgtacaatgggacccttaaaagggacacagagaataaacgctacagctcttacagc
caaatggaaggctggggcagcaagaactacaacaaaatctgcaacacccccagggccggc
agtgactactgctttgctcagaccatgaagaccagccggagtgagcctgacctctgctgt
gagccaccccggggcactcttaagagaaatcagggataccaggcagggcacaaagcaacc
ctgaatcgccaaagcatctacagcagctatagcacccagcaagggactactaggacaaat
aaaaaaatggcagcgcgtgctctctcctgtccttcaagcaataagcaggaggtggtatat
gctgagcctaggatgagcggcaagcaggagatggcatatacacggtctcagtccagctcc
aaaatatgcagtgatgagccagactatggtaccatgaccatccagaaagccattcagttc
ctgtgctcctcggatgagaaacatcaagccatgggtgcttactacctccagcacacctgc
ttccaggatgaatctgccaagcaagaggtctaccggctgggtggcattgccaagctggtc
gaactcctccgcagcacaaaccagaatgtgcagcaggccgcagccggggctcttagaaac
acagtcttcagaaatccggtcaacaagatagaaacccgacggcagaatggaatcagggag
agtgtgagccttctgaggagagctgggaacactgaaacacagaagcagctgacagggctg
ctatggaacttgtcctccacggatgaactgaaagaagagttgatacaggaagccctccct
gtcttgacagattgtgttattgttcctttctctggctggtctgatggcaccagtaatagg
acaagacaaattattgacccagaggtattcttcaatgccacaggctgtttgaggaacctg
agttctgcagacatgggacgccagaccatgagaaactaccctggcctggttgattcagtc
atgacttatgcccagaactgcgtggctgctaaccgacctgatgataagtctgtggagaac
tgcctctgcatcctgcacaatctctcctaccgcctggatgccgaggtgcccaataaatac
acccaactcaaccacatggcccggaatgcctccatggaccgatctctcacaggctgcttc
aacagcagaggaggaaaactggaggaagatgaatataatgtccctctgcctgaggaggat
tacaaacccagaggagccaactggctttaccattctgatgccatccgcacatacctgtcc
ctgatggacaagagcaagaaagactccaccctggaagcttgtgcaggagccctgcagaac
ctcactgcaagcagaggactgatgtctaatgcaatgagccaggtgattggtttgaaggaa
aagggattgcctcgtatagcacggcttctccaatccaactgctctgaagttgtccgatct
gggacttctttgctgagcaacatgtcccgacatcctgttctccataaaaccatggctcac
caggtgcttccagatgtgtcgcgtctcctgtccttccagagtgcaaacaccaacacctat
ggagagatcatgtcatcagcttgctacactctgaggaacctcatcatgtccaacccacac
ctgggcaaatcctacttgacaagcaacgtgatgaataatgtattaagcctctgccgaaat
ggctcctgcccaaaagctgctgaggctgctcgtctcctactgagtgacctttggtcaaat
agggagctgcagagtgtgctcaaacagcaaggatttgataagaacatgatgggatcctta
gcttcgaccactttcaggaccctgtcctccagattttag
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