Alligator mississippiensis (American alligator): 102567507
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Entry
102567507 CDS
T03087
Symbol
TDG
Name
(RefSeq) thymine DNA glycosylase
KO
K20813
thymine-DNA glycosylase [EC:
3.2.2.29
]
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
102567507 (TDG)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amj03400
]
102567507 (TDG)
Enzymes [BR:
amj01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.29 thymine-DNA glycosylase
102567507 (TDG)
DNA repair and recombination proteins [BR:
amj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
102567507 (TDG)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-GeneID:
102567507
NCBI-ProteinID:
XP_014463881
UniProt:
A0A151NI16
LinkDB
All DBs
Position
Un
AA seq
404 aa
AA seq
DB search
MEAEGLGRYYSPLQQAQAFYPFPFHQVITGAPNMEIMNEQQTLEGTPETNFASEPTQEVT
RGRKRKTKSSEPKKPAAKAAKSAKSKGKQEKITNTFKVKRKVDRFNGVSEAELLTKTLPD
ILTFNLDIVIIGINPGLMAAYKGHHYPGPGNHFWKCLFMSGLSKEQLNHMDDHTLPQKYG
IGFTNMVERTTPGSKDLSSKEFREGGRILMQKLQKYQPRIAAFNGKCIYEIFSKEVFGVK
VKNLEFGLQPHKVPDTETLCYVMPSSSARCAQFPRAQDKVHYYIKLKDLRDQLKGVAPNT
EVQEVEYTFDLQLAQEDAKKMAVKEEKYDPGYEAAYGGVYSDRTVHESEQCNFSSDGTAS
SNPEYSGGSCFRDVPNGQWMTQSFTDQIPEFNNSRAQELEGSSV
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgagggcttgggcaggtattattcgcctcttcaacaagcccaagcattttat
ccatttccattccatcaagtgataactggagctcctaacatggaaattatgaatgaacaa
caaactctggaggggactccagagacaaattttgcttcagagcctactcaagaagttaca
aggggcaggaagagaaaaaccaaatcatctgagcccaaaaagcctgctgccaaagcagct
aagtcagctaaatcaaaaggcaaacaagaaaagatcaccaatacttttaaagtcaaaaga
aaagtggaccgttttaatggggtatctgaagctgaacttttaaccaagactctgcctgat
attttgaccttcaatctggacattgtaataattggcataaacccaggcttgatggcagcc
tacaaagggcatcattaccctggacctggaaatcatttttggaagtgtcttttcatgtct
gggctgagtaaagaacaattgaaccatatggatgaccacactttaccacaaaaatacggt
attggatttacaaacatggtggagagaacaacaccaggtagcaaagacctctccagtaaa
gagtttcgggaaggagggcgaattctgatgcagaaattgcaaaaatatcaacctcgcata
gcagcttttaatggaaaatgtatttatgaaatttttagtaaagaagtgtttggagtaaaa
gttaaaaacttggaatttggattgcagccacacaaggtccccgatacagaaacgctctgc
tatgttatgccatcatccagtgcaagatgtgcccagtttcctcgtgcgcaagataaagta
cattactatataaagctcaaagatttaagggatcagctgaaaggcgtcgcaccaaacaca
gaggtgcaggaggtggagtacacatttgacttacagcttgcacaagaggatgctaaaaag
atggcagttaaggaagaaaaatatgatccaggatatgaagcagcatatggaggtgtttat
agtgacagaacagtccatgagagtgaacagtgcaacttctcttcagatggaactgcatca
agcaatccagagtacagtggaggttcatgctttcgtgatgttcctaatggacagtggatg
acacagtcctttacagaccagattccagaattcaataacagcagggcacaagagctagaa
ggaagcagtgtataa
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