KEGG   Alligator mississippiensis (American alligator): 102568338
Entry
102568338         CDS       T03087                                 
Name
(RefSeq) actin, cytoplasmic type 5
  KO
K05692  actin beta/gamma 1
Organism
amj  Alligator mississippiensis (American alligator)
Pathway
amj03082  ATP-dependent chromatin remodeling
amj04145  Phagosome
amj04210  Apoptosis
amj04510  Focal adhesion
amj04520  Adherens junction
amj04530  Tight junction
amj04810  Regulation of actin cytoskeleton
amj04814  Motor proteins
amj04820  Cytoskeleton in muscle cells
amj05100  Bacterial invasion of epithelial cells
amj05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:amj00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    102568338
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    102568338
  09143 Cell growth and death
   04210 Apoptosis
    102568338
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    102568338
   04520 Adherens junction
    102568338
   04530 Tight junction
    102568338
  09142 Cell motility
   04814 Motor proteins
    102568338
   04820 Cytoskeleton in muscle cells
    102568338
   04810 Regulation of actin cytoskeleton
    102568338
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    102568338
   05100 Bacterial invasion of epithelial cells
    102568338
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:amj03021]
    102568338
   03019 Messenger RNA biogenesis [BR:amj03019]
    102568338
   03036 Chromosome and associated proteins [BR:amj03036]
    102568338
   03029 Mitochondrial biogenesis [BR:amj03029]
    102568338
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:amj04812]
    102568338
   04147 Exosome [BR:amj04147]
    102568338
Transcription machinery [BR:amj03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     102568338
Messenger RNA biogenesis [BR:amj03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     102568338
Chromosome and associated proteins [BR:amj03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    TIP60 complex
     102568338
    NuA4 complex
     102568338
  Chromatin remodeling factors
   BAF complex
    102568338
   PBAF complex
    102568338
   GBAF(ncBAF) complex
    102568338
   SWR1 complex
    102568338
Mitochondrial biogenesis [BR:amj03029]
 Mitochondrial quality control factors
  Mitochondrial dynamics
   Actin cytoskeleton organization
    102568338
Cytoskeleton proteins [BR:amj04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actins
    Actins
     102568338
Exosome [BR:amj04147]
 Exosomal proteins
  Proteins found in most exosomes
   102568338
SSDB
Motif
Pfam: Actin
Other DBs
NCBI-GeneID: 102568338
NCBI-ProteinID: XP_006273214
LinkDB
Position
Un
AA seq 376 aa
MGDEEIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQ
SKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKM
TQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLD
LAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKS
YELPDGQVITIGNERFRCPEAIFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVL
SGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISK
QEYDESGPSIVHRKCF
NT seq 1131 nt   +upstreamnt  +downstreamnt
atgggtgacgaggagatcgcggcactggtggtggacaacggctcaggcatgtgcaaggcg
ggctttgcgggtgatgacgcgccccgcgccgtgtttccctccattgtggggcgcccgcgg
caccagggcgtgatggtgggcatggggcagaaagacagctacgtgggtgatgaggcgcag
agcaagcgtggtatcctcaccctcaagtatcccatcgagcatggcattgtgaccaactgg
gacgacatggagaagatctggcaccacactttctacaacgagctgcgtgtggctcccgag
gagcacccggtgctgctcactgaggcaccgctcaaccccaaggccaaccgagagaagatg
acacagatcatgttcgagaccttcaacacgccagccatgtacgtggccatccaggctgtg
ctgtccctgtatgcctccggccgcaccactggtatcgtcatggactctggggatggcgtc
acccacactgtgcccatctacgagggctacgccctgccccacgccatcctgcgcctggac
ctggctggccgtgacctgactgactacctcatgaagatcctgacggagcggggctacagc
ttcaccaccacggctgagcgggagattgtgcgagacatcaaggagaagctctgctacgtt
gccctggactttgagcaggagatggctacagccgcctcatcctcttccctggagaagagc
tacgagctgcctgacgggcaggtgatcaccattgggaacgagcggttccgctgtcccgag
gccatcttccagccctccttcctgggcatggagtcctgcggcatccatgagaccaccttc
aactccatcatgaagtgcgacgtggacatccgcaaggacctgtacgccaacacggtgctg
tcgggcggcactaccatgtaccccggcattgctgaccgcatgcagaaggagatcacggcg
ctggcgcccagcaccatgaagatcaagatcatcgccccgccagagcgcaaatactccgtc
tggattgggggctctatcctggcttctctctccaccttccagcagatgtggatcagcaag
caggagtatgacgagtctgggccatccattgtgcatcgcaagtgcttctga

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