Alligator mississippiensis (American alligator): 102568895
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Entry
102568895 CDS
T03087
Name
(RefSeq) class II histocompatibility antigen, M alpha chain
KO
K06752
MHC class II antigen
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04145
Phagosome
amj04514
Cell adhesion molecules
amj04672
Intestinal immune network for IgA production
amj05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
102568895
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
102568895
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
102568895
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
102568895
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
amj04147
]
102568895
Exosome [BR:
amj04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
102568895
Exosomal proteins of epithelial cells
102568895
Exosomal proteins of breast milk
102568895
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
C1-set
MHC_II_alpha
Ig_3
Ig_2
DUF7451
ICAM1_3_5_D2
Motif
Other DBs
NCBI-GeneID:
102568895
NCBI-ProteinID:
XP_014456314
LinkDB
All DBs
Position
Un
AA seq
247 aa
AA seq
DB search
MWGWGLLAMVLLWGAVAQDETPHLLSQVLFCQPDSPSLGRADTFDEDQLFWFDFPSSHWL
PRLPDFAPRTSAQSPPAQIVVEAGLCKELLRGLSQMAHGFLPEAKGIPMANIFTAEPLEL
GQPNTLICQVGNIFPASVAVSWQHNGVPVTQGVNTTPYNINEDLALTVYSTLPFTPHEGD
VYACNITRQRERFSTLTYWGKAGEDGVRTGGHDMMTPRFDSWSTLTINQLPSLFSIPVFL
CRQQWGS
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgtggggctgggggctgctggccatggtgctgctatggggggcagtggctcaagacgag
acaccccacctgctgtcccaggtgctgttctgccagccagattccccgagcttgggtcgg
gccgacacctttgatgaggaccagctcttctggtttgacttccccagttcgcactggttg
ccacgactgcctgacttcgccccccgcacctctgcccagtcgccccctgcccagattgtc
gttgaggctggcctgtgcaaggagctccttcgtggcctctcccaaatggcccacggtttc
ttgccagaggctaaaggcatccccatggccaacatcttcacagcggagccactggaactg
ggccagcccaacacgctgatctgccaagtgggcaatatcttcccggcctcggtggcggtg
tcgtggcagcacaatggggtgccagtgactcagggggtcaacaccacaccctacaacatc
aatgaggacctggccttaacagtgtactcgacactgcccttcacaccgcacgagggcgat
gtctatgcctgcaacatcactcgacagagagagcgcttctccaccctcacctactggggt
aaggctggggaagatggggtgaggacaggggggcatgatatgatgacaccccgctttgac
tcctggtctaccctgactataaaccaactgccctcgttgttttctattccagtgttttta
tgcaggcagcagtgggggagttga
DBGET
integrated database retrieval system
