Alligator mississippiensis (American alligator): 102569960
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Entry
102569960 CDS
T03087
Symbol
ATN1
Name
(RefSeq) atrophin 1
KO
K05626
atrophin-1 (dentatorubral-pallidoluysian atrophy protein)
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
102569960 (ATN1)
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Motif
Pfam:
Atrophin-1
CCDC47
Motif
Other DBs
NCBI-GeneID:
102569960
NCBI-ProteinID:
XP_014459436
LinkDB
All DBs
Position
Un
AA seq
1236 aa
AA seq
DB search
MFSSSRAKENGGPTPKRMKTRQNKDSVRDRRGGGGKPRTGRGGEMWVRTEMSMRSGRKKE
TPGPREELRSRGRASPGGISTSSSDGKAEKSRQANKVGKKGRVEDSCTPKGSKQGRTEEI
SESEGEDSSAPKKTKTEELPCPQSPSDVDSLDGHSFNDEMSSDPRDIDQDNRSTSPSVYS
PGSVENDSDSSSVLSQGPSHAYHHPPLFPQSPPAAPPTDSLGRPSEPGFGLAGEVHPQPP
GGSYHSQLETQTSRIFQAQAPQPASSSSSNSSSSSAHAPLYPTANVVQVGAKGTNGVGGI
PAPGAREQNLGAKHNPPPTTPISLAAMGAGLPPQKTPPANPPAAPPVSAPSFPHVSANLP
PPPALRPLNNVAAASNSPGMVGQALSGHLPSPHGMGQDKAPALAPSRYPYAPPPPSSSSA
QYLPPSPAQTLPNYSASYAHSFPLPSALSVSSQPPKYTQPSLPSQPVWSQGPPPYSRPLG
NTSSHPPASFPGQASHHQQSSQQHHHGPGSGGGVSPATAAPPQPTGGYPHPMESGTHHPS
HAAYGLRLYPPHSQATYSQAPSAAAASSSTPAPSSASSSASAAASSSSSSSSSSSSSSSS
ASSSSSSQGTYQGVCAHPQGQSPATYTFPPPPPPSPAHGAGPPVTSASATLSTVIATMAS
SSSAPYKTVSPPIPPPAVAPYGKRAASPVPTFQPPPAYKPGSPPSSSASSFHVATPPGYG
VTSSPATGNYKTPSPTPTPTAPPLPGGIGVPAAPLPPLPLSTAQIKQEPSEEYEPPESPV
PPTRSPSPAPKVVDIPSHASQSARFNKHLDRGFNSCSRTDLYFVPLDGSKLAKKRADLVE
KVRREAEQKAREEKEREREREREKEREREKERELERSVKMAQEGRPVECSSLGSVPHRPS
FEQGSAVATVPPYLGPDTPALRTLSEYARPHVMSPSNRNHPFYVPLGAVDPGLLGYNVPA
IYSSDPATRERELREREARERDLRDRDLRERLKPGFEVKPAELDQLHAVPAAAMDPFPRH
GGLALQAAPGLHPTFPFHPGLGHLERERLALAAGPTLRPDMSYAERLAAERQHAERVAAL
SNDPLARLQMLNVTPHHHQHSHIHSHLHLHQQDAIHAASASVHPLIDPLASGSHLTRIPY
PAGTIPNPLLPHPLHENEVLRHQLFAAPYRDLPGSLSAPMSAAHQLQAMHAQSAELQRLA
LEQQQWLHAHHPLHGVPLPTQEDYYSHLKKESDKPL
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atgttttcatccagccgggccaaagagaatgggggccccacacccaaaagaatgaagact
cgacagaacaaagactcagtacgtgacaggagaggaggaggtgggaaacccagaactgga
agaggaggagagatgtgggtcaggactgagatgtcaatgcggagtggacggaagaaggag
actcctgggccccgagaagagctgaggtcacggggtcgagcctccccgggtggcatcagc
acctccagcagtgatggcaaagctgagaaatcccggcaagcaaacaaggtaggaaaaaag
ggtcgagtggaggactcctgcacacccaagggtagcaagcaaggccggacagaggagatt
tcagagagtgaaggggaggacagtagtgcccccaagaaaaccaaaactgaggagctgcca
tgtcctcagtctccctcagatgttgacagcctcgatggccacagcttcaatgacgagatg
agcagcgacccccgggacattgaccaggataaccgcagcacctcgcccagtgtctacagc
cctggcagtgtggagaatgactcagattcctcctctgtgctgtcccaggggccatcccat
gcctaccaccaccccccactcttcccccagagccccccagctgcccctcctactgacagt
ctaggccgtccatctgagccaggctttggcctagctggtgaggtccaccctcagccccct
ggagggagttaccactctcaacttgagacgcagacttccaggattttccaggcccaagca
ccacagcctgcttcttcttcctcctccaattcttcctcctcctctgcccatgctcctctt
tatcctactgccaatgtggtccaggttggggccaaaggcaccaatggagtgggaggcatt
ccagcaccaggggcacgtgaacagaaccttggtgctaagcacaaccctccgcccactaca
cccatctccctggctgccatgggagcagggctgcctcctcagaaaacacctccagccaac
cccccagctgcacccccagtctctgccccttcctttccccatgtctcagccaacctacct
cccccgccagccctgcgcccactgaataacgtggctgccgcctccaactctccagggatg
gtggggcaggctctgagtggacacctcccatcaccccatggcatggggcaggacaaggca
ccagccttggccccttcacgttatccttatgctcccccacccccttccagctcctctgct
caatatctcccaccttcccctgcccagaccctgcctaactacagtgcttcctatgcccac
tccttccccctccctagtgctctctctgtctccagccagcctcccaagtacacccagccc
tctctgccctcccagcccgtgtggagccagggtccaccaccgtacagccgcccattgggc
aacaccagctcccatcctcctgcctcctttcctggccaggcctcccaccaccagcagtca
tcacagcagcaccaccatggccctggcagtggagggggtgtttctccagccacagcagct
cctcctcagccaacaggaggttacccacaccccatggagtcaggcactcatcacccttca
catgctgcctatgggctgcgcctctacccaccccacagccaggccacatatagtcaggct
ccttcagctgctgctgcctcctcctccacccctgccccctcgtctgcctcctcctctgcc
tctgccgccgcctcctcctcctcctcctcctcttcctcctcctcctcctcctcctcctcc
gcctcttcctcttcctcttcccagggcacataccaaggggtctgtgcccacccacagggt
cagagtcctgccacctacaccttccccccaccacccccaccttctcccgcacatggggct
ggacccccagtcacttctgcatctgccactctctccactgtcatagctaccatggcctcc
tcctcctcagccccctataaaacagtgtcgccccccataccgccacctgctgtggccccc
tatgggaagcgggcagcctcacctgtccctacattccagcccccgcctgcctacaagcca
ggctctcccccttcatcctctgcttcatcattccatgtggccacgccgcctgggtatggg
gtgacctcttctcctgcgactggcaactacaagactccctccccgacccccacccccact
gctcccccactgcctggaggcatcggagtccctgctgccccgctgccaccactgccactg
agcactgcacaaattaagcaagagccatcagaggagtatgagcccccagagagcccagtg
ccgcccactcgaagtccctcaccagcccccaaagtggtggacataccaagtcacgccagc
cagtcagccaggtttaacaaacacctagaccgtggcttcaactcctgctctcgcacagac
ctgtattttgtgcccctggatggctccaagctggccaagaaacgagcagacctagtggag
aaggtccgcagagaagcagagcagaaggcccgggaagagaaggaacgggagagggaacgt
gaaagggagaaggagagagagcgagagaaggagagagagctggagcgaagtgtgaagatg
gcacaggaggggcgtccagtggaatgttcgtctctggggtccgttcctcaccgtccatcc
tttgagcagggcagtgctgtggctactgtcccaccatacctgggccccgacactccagct
ttgcgcaccctaagtgaatacgcccggccccatgtcatgtcccccagcaaccgcaatcac
cccttctatgtgccgctgggtgcagttgacccaggcctgctgggctataatgtgccagct
atctacagcagtgacccagccacacgggagcgggagctgcgggaacgagaagcccgtgag
cgagacctgagggaccgggacctgcgtgagcgcctcaagcctgggttcgaagtcaagcca
gctgaactggaccagctccatgctgttcctgctgctgccatggatcccttcccacgccat
ggggggctggctctccaggcagccccaggcctgcatcccacttttcccttccacccaggg
ctgggtcacctggagcgggaacggctggcactagcagctggcccaaccctgcgccctgac
atgtcatatgccgagcgactggcagctgaaaggcagcatgcagagcgggttgctgctctg
agcaacgaccctctggcccggctgcagatgctcaatgtgacaccccatcatcaccagcac
tcgcacatccactcccaccttcatctgcaccagcaggatgccatccatgcagcctcagcc
tctgttcacccccttattgacccactggcatcagggtcacatctcactcggataccgtac
ccagctggtaccatccccaacccactacttcctcaccccctccatgagaatgaagtgctg
cgccaccagctttttgctgccccctacagggacctgccaggatctctctctgctcccatg
tcagcagctcatcaactccaggccatgcacgcacagtcggcagagctgcaacgtttggct
ttggagcagcagcagtggctccatgcccatcaccctttgcatggagtgccgcttcctaca
caggaggattattacagtcacctgaagaaagaaagtgacaaacccctttaa
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