Alligator mississippiensis (American alligator): 102571178
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Entry
102571178 CDS
T03087
Symbol
WDPCP
Name
(RefSeq) WD repeat containing planar cell polarity effector
KO
K22863
WD repeat-containing and planar cell polarity effector protein
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
amj03037
]
102571178 (WDPCP)
Cilium and associated proteins [BR:
amj03037
]
Primary cilia and associated proteins
Ciliogenesis and planar polarity effectors (CPLANE) complex
102571178 (WDPCP)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Frtz
WD40_Prp19
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
WD40_CDC20-Fz
Motif
Other DBs
NCBI-GeneID:
102571178
NCBI-ProteinID:
XP_014450595
LinkDB
All DBs
Position
Un
AA seq
707 aa
AA seq
DB search
MSFCLTEMHLWSLKNTLHIRDSDIGIHQYYDKKETVSQMKYGYLEEKQQLMESRDYPWIL
KNKRPEKLRDTLKELEELMQNSQCVLSKWKNKYVCQLIFHSGVLVSLSISGPQLEKVVID
RTLVGKLISDTISDAVLTDSFIILSFWEQNKLCFIQFTKKTGSPDINKRLEKLSSLDFKI
SYVDIPGPENRRMKRHLAINCMQDMIICWWSATNDGAWPWSPMSSERNRANLLLLSCARG
RMEVLSYICTEWDPLDASFSANQSYQVHTVEHSISADKEPMADSCTYEYVKNKIQCVAVT
RIPLRSKAITCCRNIAEDKLILGCEDSSIILYEIQQRVTLLAQAELLPALISFHPSGAIF
LVGSSQGELQLFDTALSPIKMQLLSEECSPMATLQFSKQFDVSSSLIQMQWAAPQVAFHS
IDGTDVHDILLLRFDNGPIGVLQFKFGVIPRGQLSLLDIIHQYIQYDEMQEAINVLSSMN
WNTMGQQCYISLSAIVNHLFRKKLTAEREAQLEASLGTFYAPARPLLDMTVLEYRDPISR
YARRFFHHLLRYQRFEKAFLLAVDIGARDLFMDIHYLALDKGELALAEVAKKKANDIDAE
SITTGVERLGHFDRADTPNEAFVDPSLTPQEEHNFPVSDSNFNHTTQSSSSNRQTDNRKK
ELGMDISAASLMDKSLPWNLAGNFGDVRTEQETEGSGSLKVVHFGLV
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgtctttctgcctgactgagatgcacctgtggtctttgaagaataccctacatattagg
gacagtgatattgggatccatcagtactatgacaaaaaagaaacagtatcacaaatgaag
tatggttacttagaagagaagcaacagctcatggaatctcgagattatccttggatactt
aaaaacaaacgtccagaaaaactgcgagataccctcaaggagctggaggagttgatgcaa
aacagtcagtgtgtgctgagcaaatggaagaacaaatatgtctgtcagctcatctttcat
tcaggtgtactggtgtccctaagcatttctgggcctcagctggagaaagtggtgattgac
aggaccctggtggggaagctcatctccgacaccatcagtgatgctgttcttactgacagt
ttcatcatcttgtcattttgggagcaaaacaaactctgctttattcagtttacaaagaag
acaggttctcctgatataaacaaaagacttgaaaaactctcgtccttggattttaagatt
tcttatgttgacatacctggaccagaaaataggaggatgaaacgtcatctggcaataaat
tgtatgcaagatatgatcatttgctggtggtcagctactaatgatggagcatggccttgg
tctcctatgtccagtgaaaggaacagagccaacttattgcttttaagctgtgcacgtggc
agaatggaggttttaagttacatttgtacagaatgggacccacttgatgctagctttagt
gctaatcagtcttaccaagtgcacacagtagagcattccatctctgcagacaaagagcct
atggctgacagttgcacttatgaatatgttaagaacaaaatacagtgtgtggcagtcacc
agaataccactaagatcaaaggccatcacctgctgcagaaacattgcagaagacaaactg
atccttggctgtgaagattcttccataattctgtacgaaatccagcaaagagtgactctg
ttagctcaggcagaactattgcctgccttaataagcttccatcccagtggtgccatattt
cttgttggcagctctcaaggggaactgcagctttttgacacagcactatcaccaatcaaa
atgcagcttttgtcagaagagtgttcacccatggcaactttgcagttcagcaaacaattt
gatgtgtcaagtagtcttatccagatgcagtgggcagctcctcaagttgcattccacagc
attgatggcacagatgttcatgatattctattacttagatttgacaatggacctatagga
gtacttcagtttaaattcggtgtcatccctagaggacagctgagtcttctggacatcatc
caccaatacattcagtatgatgagatgcaagaggcgattaatgtcctgagtagtatgaac
tggaacactatgggccaacagtgttacataagcttgagtgccatcgtaaatcaccttttt
agaaaaaagttgacagcagagagagaagcacagcttgaggcaagccttggaaccttttat
gctccagcaaggcctctgttggatatgactgtcttggaatatcgggatccaatcagcaga
tatgcaagaaggttcttccaccacctgctcaggtatcagagatttgaaaaggcatttctg
ctagctgttgacataggtgctcgtgacctgtttatggacatccattaccttgcactagat
aagggtgaattggcactagctgaagtggcaaagaaaaaggctaatgacattgatgcagaa
tcaataactactggagttgaacgtttgggacattttgacagagcggatactccaaatgaa
gcttttgttgacccatctttaacacctcaagaggaacataacttccctgtttctgactca
aacttcaaccatacaacacagagcagttcttctaacagacagacagacaacagaaagaag
gagctgggaatggacatctctgctgcctctctaatggacaaatccttgccctggaatcta
gcagggaattttggagacgtgcgtacagagcaggaaactgaaggaagtgggtctcttaaa
gtggtacactttggtctagtataa
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