KEGG   Alligator mississippiensis (American alligator): 102571306
Entry
102571306         CDS       T03087                                 
Symbol
GGPS1
Name
(RefSeq) geranylgeranyl diphosphate synthase 1
  KO
K00804  geranylgeranyl diphosphate synthase, type III [EC:2.5.1.1 2.5.1.10 2.5.1.29]
Organism
amj  Alligator mississippiensis (American alligator)
Pathway
amj00900  Terpenoid backbone biosynthesis
amj01100  Metabolic pathways
Module
amj_M00367  C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:amj00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    102571306 (GGPS1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:amj01006]
    102571306 (GGPS1)
Enzymes [BR:amj01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.1  dimethylallyltranstransferase
     102571306 (GGPS1)
    2.5.1.10  (2E,6E)-farnesyl diphosphate synthase
     102571306 (GGPS1)
    2.5.1.29  geranylgeranyl diphosphate synthase
     102571306 (GGPS1)
Prenyltransferases [BR:amj01006]
 Terpene biosynthesis
  Prenyl diphosphate synthase
   102571306 (GGPS1)
SSDB
Motif
Pfam: polyprenyl_synt
Other DBs
NCBI-GeneID: 102571306
NCBI-ProteinID: XP_006278961
LinkDB
Position
Un
AA seq 300 aa
MEQAEQTSKRLLLEPYKYLLQLPGKQVRTKLSQAFNHWLNVPEDKIQVIIEVTEMLHNAS
LLIDDIEDNSKLRRGFPVAHSIYGVPAVINCANYVYFLGLEKVLTLDHPDAVKVFTRQLL
ELHQGQGLDIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSNYNKDLKPLLNTL
GLLFQIRDDYANLRSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPESTQVQNILRQRTEN
VDIKTYCVQYLETVGSFEYTRQTLKELEAEAYRQIELLGGNPELVALVEHLSKMFRDDKN
NT seq 903 nt   +upstreamnt  +downstreamnt
atggagcaggcggaacaaacatctaaaagacttcttttagagccttacaagtacttactt
caactaccaggtaagcaagtgagaaccaaactgtcacaggcctttaatcactggctgaat
gttccagaagacaaaatacaggttatcattgaagtgacagagatgttgcacaatgccagc
ctgcttatagatgatattgaagataactcaaagctacggcgaggctttccagtggcccac
agcatctatggagttccagctgtaataaattgtgctaattatgtatatttccttggccta
gagaaggttttaacacttgatcacccagatgcagtaaaagtatttacccgtcagttactg
gaacttcatcagggccaaggcttggatatttattggagagataattatacctgtcccaca
gaggaagagtataaagccatggtactacaaaagacaggtggtctttttggactagctgtg
ggccttatgcagttgttctccaactataacaaagacttaaaaccactcctgaatactctt
ggcctcctcttccaaataagagatgactatgctaatttacggtcaaaagaatatagtgaa
aacaagagtttttgtgaagacttaactgagggcaagttctcatttccaactattcatgct
atttggtccaggcctgaaagcactcaggtgcagaatattttgcgtcaaaggacagaaaat
gtagacattaaaacctattgtgtacaataccttgagactgtgggttcctttgagtacaca
cggcaaactctgaaagaacttgaagctgaagcatatagacaaattgagttacttggaggg
aaccctgagcttgtagctctagttgaacacttaagcaaaatgttcagagatgacaaaaat
tga

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