Alligator mississippiensis (American alligator): 102573381
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Entry
102573381 CDS
T03087
Symbol
EFTUD2
Name
(RefSeq) elongation factor Tu GTP binding domain containing 2
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102573381 (EFTUD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
amj03041
]
102573381 (EFTUD2)
Spliceosome [BR:
amj03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
102573381 (EFTUD2)
Complex C
U5 SnRNP specific factors
102573381 (EFTUD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
102573381
NCBI-ProteinID:
XP_006278641
UniProt:
A0A151PCH9
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All DBs
Position
Un
AA seq
972 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDDDDDELGREAKDVDELDDDDDDDDMGDHDEDHPGMEVVLH
EDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFSLMEQALPVTVYEMDFLA
DLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVG
IKSTPVTIVLPDTKGKSFLFNVMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTE
RLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLIL
SPLLGNVCFSSSQYSICFTLGSFAKIYADTYGDINYQEFAKRLWGDIYFNPKTRKFTKKA
PTSSSQRSFVEFVLEPLYKILAQVVGDVDTTLPRTLDELGIHLTKEELKLNIRPLLRLVC
KKFFGEFTGFVDMCVQHIPSPKVGAKTKIEHTYTGGIDSDLGEAMSECDPDGPLMCHTTK
MYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIE
VNRVPAGNWVLIEGVDQPIVKTATITEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVV
TFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQT
KYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKSLLGSVKDSIVQGFQWGTREGPLC
DELIRNVKFKILDAVIAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPA
DCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSV
FHHWQIVPGDPLDKSIIIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLE
LAKQDVVLNYPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggacacggacttgtacgacgagttcggcaactacatcgggcccgagctcgactcggac
gacgacgacgacgagctgggccgggaggccaaggacgtggacgagcttgatgatgatgac
gatgatgacgatatgggagaccatgatgaagatcaccctggaatggaggtggtactgcat
gaggataagaaatactatcccactgcagaagaggtctatgggcctgaggtagagactata
gtgcaggaagaggatacacagcctctcactgagccaataattaaacctgtgaaaaccaag
aaattctccctgatggagcaggcattacctgtcactgtatatgagatggatttcttagca
gatctgatggacaactcagagctgattcgtaatgtgactctgtgcggacacctccaccat
ggcaagacttgttttgtggattgcttgatagagcagacgcacccagaaataaggaagcgc
tatgatcaggatctttgctacactgatatactgttcacagagcaagagaggggtgttgga
atcaagagtactccagtgactatcgttttaccagacaccaaagggaaatcttttctcttc
aatgtcatggatactcctggccacgtgaacttttcggatgaagttacggctggccttcgt
atttcagatggagttgtgcttttcattgatgcagccgaaggggttatgttgaatacggag
aggctgatcaagcatgcagtgcaggagaggctggcagtgaccgtgtgcattaataagata
gatcgccttatcctggaactgaagcttcccccaactgatgcctattacaaacttagacat
attgtggatgaagtcaatggcttgatcagcatgtattccactgatgagaacctcatcctc
tcccctcttctgggaaatgtctgcttttctagctcccagtacagcatctgttttacactg
ggatcatttgcaaagatttatgcagacacatatggagatatcaattaccaggagtttgca
aagcggctttggggtgacatctacttcaaccccaagacgcgaaaattcactaaaaaagcc
ccaaccagcagttcacagcgcagctttgtagagtttgtccttgagcctctgtacaagatc
ctggctcaggtggtcggtgatgtagacaccacactccccaggactctggatgagctaggc
attcatctgaccaaggaggagctgaaactgaacattcgacccctgctacgactggtctgc
aaaaagttctttggggagttcacaggatttgtggacatgtgtgtacagcacattccctcc
ccaaaggtgggagccaagaccaaaattgagcacacctacactggaggcatcgactcggac
ctgggagaggccatgagcgagtgtgaccctgatggtccattaatgtgtcacaccacaaaa
atgtacagcacggatgatggggtgcagttccatgcctttggcagggtgctgagtgggacc
atccatgcagggcagcctgtcaaggtccttggagaaaactacaccctggaggacgaggag
gattcccagatctgcactgtggggcgtctctggatctcggttgcaaggtaccacatagag
gtgaaccgggtacctgctggtaattgggtgctgattgaaggagtggaccagcccattgtg
aagactgcaaccatcacggaacccagaggcaatgaggaggctcagatctttcgtcctttg
aagttcaacaccacgtctgtcatcaaaatagctgtggagccagtcaacccttcagagctc
cctaagatgttggatggcctgcggaaagtcaacaaaagttatccatcactcaccaccaag
gtggaagaatctggagagcatgtgatcttgggtacaggggagctctacttggactgcgtg
atgcatgatttacggaagatgtactcagagattgacatcaaagttgctgatccagttgtg
acattttgtgagactgtggtggaaacctcctccctgaagtgttttgcggagacacccaat
aagaagaacaagatcaccatgattgcagagccactggagaaggggcttgctgaggacatt
gagaatgaggtggtccagatcacatggaacaggaaaaagctaggtgagttcttccagacc
aaatatgactgggatctgctggctgcccgctccatctgggcctttggacctgatgctact
ggcccaaacattttggtagatgacacgttgccatcagaggtggataagtcgctgctgggc
tctgtgaaggacagcatcgtgcagggtttccagtgggggactagggaagggcccctctgt
gatgagttgatccgcaatgtgaaatttaagattctggatgcagtgattgctcaagagcca
ttacaccggggaggtggtcagattatcccaacagccaggagagttgtatactctgccttt
cttatggccaccccacgtctgatggagccatactactttgtggaggtgcaggcccctgct
gactgcgtgtctgcagtctacactgtgctggccaggcggagaggtcatgtgacccaggac
gctcctatcccaggttcccctctttacaccatcaaagccttcatcccagctattgattca
tttgggtttgaaaccgacttgaggacacacacgcagggacaggccttctcactgtctgtc
ttccaccactggcagatcgtgcctggagatcccttggacaagagcatcatcattcgaccc
ctagagccccagccagcgcctcacctggccagagagttcatgatcaagaccaggcgcagg
aagggcttgagcgaggacgtcagcatcagcaagttcttcgacgatcccatgttgctagag
ctggcgaagcaggatgttgtcctgaactaccctatgtga
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