Alligator mississippiensis (American alligator): 102575405
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Entry
102575405 CDS
T03087
Symbol
SMCR8
Name
(RefSeq) Smith-Magenis syndrome chromosome region, candidate 8
KO
K23611
guanine nucleotide exchange protein SMCR8
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102575405 (SMCR8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amj04131
]
102575405 (SMCR8)
Membrane trafficking [BR:
amj04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
102575405 (SMCR8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Folliculin
Motif
Other DBs
NCBI-GeneID:
102575405
NCBI-ProteinID:
XP_006272771
UniProt:
A0A151N1Y9
LinkDB
All DBs
Position
Un
AA seq
935 aa
AA seq
DB search
MISAPDVVAFTKEEELEEEVYDEPPLPEEYSVPLYPFATYGANPWSKLSGSKFPRDFILI
SEFSEQVGPQPLLTIPDDAKVSGTFDLNYFSLRIMSVDYQASFVGHPPGCAYPKLNFVED
SKVVLGDSKEGAFAYVHHLTLYDLEARGFVRPFCMAYISTDEHKIMQQFQELSAEFSKAS
ECLKTGNRKAFANELEQKLKDLDYTRTVLHNETEIQKKANDKGYYTTQAIEKANELASVE
KSIIEHQDLLKQIRSYPYRKLKDSDFHPYEPERAPDQANASFDLDSTTSHHDEPGETHLY
ARLPPYTPKLIKAKSAKCFDKKLKTLEELCDIYFFTQTVDQLNQIERTFRGDVCYLLTNQ
IKRALLKQQTIVNFLFEDVSVLDEKPAEKHPAGCQGCPQDTVNTKSLEEFPIPKVLISLG
SYKSSVESVPIKMDPEMEDPQELKVSDPPAEDHQENLEYLDADIKGSISSGESIEVLGTE
KSAPVLTKSESQASLPISSSPHMVRNKAVSGRTISEDSIEVLSTCPSESLIPEDFKASYP
SAINEETYADDEEGGIHFSPSLTPDNIEEREGRSEQEHLLQADSACCIGKESPSFLEPLP
DLRRKHCDDDGVVSIPPQPYRQADQGLHVNFSDYLSHDGVPGGLLSYEPDPHYLLSSRDV
SKMSLDECSDSTSYMSSAASTCSDRTPSPAHPISHFNERHKKKAGQNALRFIRQYPFAHP
AIYSLLSGRTLVVLGEDEAIVKKLVTALSIFVPNCSAYTKPVKHWVTFPLHIMDFQKWKL
IGLQRVGSPAGASMLHALTRYSRYVSILDADSKTLRCPLYKGTLVPRLADHRTQIKRGST
YYMQVQSALTQLCSKAFLYAFCHHLHLPINEAEVEESIANRRMNFLKLQLGLVNEDIKIV
QYLAELLKLQYLQEPGRGATPQLRFDYVPSFLYKI
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atgatcagcgcccccgacgtagtggccttcaccaaagaggaggagttggaggaggaggtg
tacgacgagccgcccctgcccgaggaatactccgtgcccctctaccccttcgccacctac
ggcgccaacccctggtccaagctctcgggctccaagttcccccgggacttcatcctcatc
tccgagttctccgagcaagtggggccccagcccttgctgaccatcccagatgacgccaaa
gtgtccggcacgttcgatctcaactatttctccctccgcatcatgtccgtggattatcag
gcctccttcgtggggcacccgccggggtgcgcctacccaaagttgaactttgtggaggac
tccaaagtggtcctgggagattcgaaagaaggagcgtttgcctacgtgcaccacctgact
ctctacgaccttgaagcgagaggcttcgtgaggcctttctgcatggcctacatttccacc
gacgagcacaaaatcatgcagcagttccaggagctctctgcagagttctccaaagcctcc
gagtgcttaaagacgggtaacaggaaagcttttgctaacgaactcgaacagaagctgaaa
gacctcgactatactaggactgtgctgcacaatgaaacggagattcagaagaaagccaat
gacaaagggtattacactacccaggccatcgagaaagcgaacgaactagccagcgttgaa
aaatcgattatcgagcaccaagacttgctgaagcaaatcaggtcatatccttatagaaaa
ctgaaggattctgatttccatccatacgagccagagcgtgccccggatcaagctaatgca
agttttgatctggactcaactacctcccaccatgatgagcctggtgaaacgcatctgtat
gcacggttgccaccctacacccctaagctcatcaaagcaaagtctgccaaatgctttgac
aagaaactaaaaaccctggaggagctctgtgacatttatttttttacccaaaccgttgat
cagctgaatcagatagagcgaactttcagaggtgatgtctgctacctcttgacaaatcag
atcaaaagagcacttttaaagcaacaaactatagtaaacttcctgtttgaagatgtgtct
gtcctagatgagaagccagctgaaaaacaccccgctggttgtcaggggtgtcctcaggac
actgtcaacaccaagagtttagaagagtttcccatccctaaagtgctgatcagcctggga
tcttacaagtcgagtgtggagtctgtgcccatcaagatggatccagagatggaagatcct
caggagctaaaagtgagtgatcctcctgccgaggaccaccaagagaacttggagtacctg
gatgcagatattaaagggagcatcagcagtggggagagcatcgaggttttgggaacagaa
aagtctgctcctgttctgaccaaatctgagagccaggctagcttgcccatcagttcaagc
ccccacatggttagaaacaaagcagtcagcggaagaaccatcagtgaggacagcattgaa
gtcctgagcacgtgtccctcagaatctctgatcccagaagattttaaagcaagctaccca
agtgccattaacgaggaaacttatgcggatgatgaagagggaggtattcacttcagccca
agtttaactcctgataatattgaagagagggaaggcaggtcagaacaggagcacttgctg
caggcggattctgcctgttgtattgggaaagagagtcctagcttcctggagcctctgcct
gacctgaggcgaaagcactgcgatgacgacggcgtggtcagcattcccccgcagccgtac
aggcaggcagaccagggccttcatgtgaacttctcagactacttgtcccacgatggtgtc
cctgggggactcctctcgtacgaacccgatccccattacttactgagcagccgagacgtc
agtaaaatgagcttggacgaatgctccgactccacaagctacatgagcagcgcggcttcc
acgtgctctgatcggactccttctcccgcccatccgattagtcacttcaatgaaaggcac
aaaaagaaagccggccagaatgccttgaggttcattaggcaatacccctttgctcaccct
gcgatatactctctgctcagcgggaggacgctggtagtcctgggagaagacgaagcaata
gtaaagaaactggtcactgctctctccatcttcgttccaaattgcagtgcatacacgaag
cccgtgaagcactgggtcactttccctttgcatatcatggatttccagaagtggaagctg
attgggctgcagagagtggggtcccctgccggagctagcatgctgcacgccctgactcgc
tacagccgctacgtgagcatcctggatgccgacagcaagactctgcgctgccccctttac
aaggggacgctggtgccccggctggccgaccaccgcacacagatcaagcggggaagcacc
tactacatgcaagttcaaagcgccctcacccagctgtgctcaaaagccttcctgtatgcc
ttctgccaccacctgcacttgcccatcaatgaggcagaggtggaggagtccatcgcgaac
cgccgcatgaacttcctcaagctccagctagggctggtgaatgaagacatcaaaatcgtg
cagtacctggcagagctgctgaaactgcagtaccttcaggagcctggcaggggtgccacc
ccccagctgcggtttgactacgtccccagctttttgtacaaaatctaa
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