Alligator mississippiensis (American alligator): 102575637
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Entry
102575637 CDS
T03087
Symbol
SETDB1
Name
(RefSeq) SET domain bifurcated 1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj00310
Lysine degradation
amj01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
102575637 (SETDB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amj03036
]
102575637 (SETDB1)
Enzymes [BR:
amj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
102575637 (SETDB1)
Chromosome and associated proteins [BR:
amj03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
102575637 (SETDB1)
Heterochromatin formation proteins
Other heterochromatin formation proteins
102575637 (SETDB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5604
Tudor_4
SET
Tudor_5
MBD
Pre-SET
Chromo_MORC2_6th
Motif
Other DBs
NCBI-GeneID:
102575637
NCBI-ProteinID:
XP_014451583
UniProt:
A0A151M5E2
LinkDB
All DBs
Position
Un
AA seq
1347 aa
AA seq
DB search
MRAGAAEVFPPESACVVLSPAFAAASRGEVWSARATVAGSGVGAPQCSALERSPALASRV
AGSEMDSQEIGELQQEVMEELGISMEDLQQFIDEELEKLECVKQRKKQLEELEKNVKQKE
AEVAHVDQLFDDASRAINKCEVLVKDLYSKLGLQYRESSSEDEDSASKPTEVIEIPDEDD
DDVMSVDSGDTSKNPKDQTLLREAMAAMRKSAQDVQKFMDAITKKKTTQETQRDGVSSQQ
SSVNASQQANSGGDLSKDGDLTVGMRILGKKRTKTWHKGTLIAIQSVGESRRPGGAGKKY
KVKFDNKGKSLLSGNHIAYDYHPLPEKLYVGSRVVAKYKDGNQVWLYAGIVAETPNVKNK
LRFLIFFDDGYASYVTQPELYLVCRPLKKTWEDIEDVSCRDFIEEYITAYPNRPMVLLKS
GQLIKTEWEGTWWKSRVEEVDGSLVKILFLDDKRCEWIYRGSTRLEPMFSMKTSTASTQE
KKQSGQARTRPNVGAVRSKGPVVQYTQDLTGTGTQYKPIEQMQATVLGSQPVSPQPAEIE
GSDSQLAQSRKQVAKKSTSFRPGSVGSGQSSPASPVLSETPPIGRTGVNQQVYRFPSTSL
PSQPISGVAPSFHGIMDRVPNEPSYHAPMEKLFYLPHVCSFTCLSRVRPIRSDQYRSKNP
LLIPLLYDFRRMTARRRINRKMGFHVLYKTPCGLCLRTMQEIERYLFETDCDFLFLEMFC
LDPYVLVDRKFQPYKPFYYIADITKGKEDVPLSCVNEIDSTPPPQVAYSKERIPGKGVYI
NTSWEFLVGCDCKDGCRDKSKCACHQLTVQATGCTPGGQINHNSGYQYKRLDECLPTGVY
ECNKRCKCNVNMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGKILTD
DFADKEGLEMGDEYFANLDHIESVENFKEGYESDAKCSSDSSGVDLKDDDDDNTGSEEQE
ESNEDSSDDNFGKDEDFSTNSVWRSYATRRQTRGQKENGLSETASKDSGLARQVSHEESA
VAVSCKLPVSEETSKNKVASWLNSNSMTDSFQDNDSASSFKMNEAGEAKAGKMDAPGERE
RASTSGLGGLDAEGKGQKKEESEETNKFPLLSETTGRLYGYNPSPPKLEGVRRPLSKTTL
HQSRRQSAPPQPSTDDVLTLSSSTDSEGENGQTASGQAQGNANDSDDIQTISSGSEEEDD
KKNPSSGLGPVKRQVAVKSTRGFALKSTHGIAIKSTNLASADKGESAPVRRTTRQFYDGE
ESCYIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKRIRAGTELTWD
YNYEVGSVEGKELLCCCGAIECRGRLL
NT seq
4044 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgctggcgccgcggaggtatttccgcccgagagtgcctgtgtagtgctgtcccct
gctttcgcggccgcctctcgaggggaggtttggtccgctcgggccaccgtcgccggaagt
ggtgtcggggcccctcagtgcagcgccctggaaaggagcccggccctcgccagccgcgtt
gcagggagcgaaatggattcccaggagattggagagctgcagcaggaagtgatggaggag
ctgggcatctccatggaagatctccagcagttcattgacgaggagctggagaaactcgag
tgcgtgaagcaacgaaagaagcagctggaagagctggaaaagaacgttaagcagaaagag
gcagaagtagctcacgtggaccagctctttgatgacgcctcaagagccatcaataaatgt
gaggtgctggtaaaagatctctactccaagctagggcttcagtatcgtgagagcagctct
gaagatgaggactcggcttccaagcccacggaagtgattgaaattccagacgaggatgat
gatgatgtcatgagcgtggattcaggtgatacaagtaaaaacccgaaggatcagactctg
cttcgagaagccatggccgcgatgaggaaatctgcccaggatgttcagaaattcatggat
gccattaccaaaaaaaaaaccacccaggaaacgcagagagatggggtttcctctcagcag
agctcagtaaatgcatcccagcaagcaaactctgggggcgatctcagcaaggatggtgat
ctcacagttggcatgcgcatcctgggcaagaaaaggaccaagacatggcacaagggaacc
ctgattgcaatccaatcagtgggcgagtcccgccgccctgggggtgctggcaagaagtat
aaagtgaagtttgacaacaaagggaagagtttgctttctggcaatcacattgcttatgac
tatcacccccttcccgagaagctgtatgttggaagccgggtcgtggccaaatataaggat
ggaaatcaagtctggttgtatgctggcatcgtggctgaaactcccaatgtgaagaacaaa
ttgaggtttcttatcttctttgatgacggctatgcttcctacgtcacccagccagagctg
tacctggtctgcaggccgttgaagaagacctgggaagatattgaggacgtttcctgccgg
gatttcattgaggagtacatcacggcctaccccaaccgccccatggttctgctgaagagc
ggccagctgattaaaacagagtgggaagggacatggtggaaatccagagtggaggaagtg
gatggcagcttggtcaaaatcctcttcttggatgacaagcgctgcgagtggatttaccgc
ggctccacacgcctcgaacccatgttcagcatgaaaacctccacagcctccactcaggaa
aagaagcagagcgggcaggcgaggacgcggcccaatgtcggtgctgtgcggagtaagggg
cctgttgtacaatacacccaagacctgacaggaaccggcactcagtataagcccatagaa
cagatgcaggcgacagtgttgggctctcagcctgtttctccacagcctgctgagattgaa
ggctctgacagtcagctggctcaatctaggaagcaagtggccaaaaaaagcacttccttc
cgtcctggctcggtggggtccgggcagtcatctcctgcttctcctgtcttaagcgagact
ccccccattggaagaaccggagtgaaccagcaagtctaccggttcccaagcacatctctt
ccgtcgcagccaatcagcggggtggcaccatcattccatggcataatggaccgggtgccc
aacgagccctcgtaccatgcccccatggagaagctcttctacctgccccatgtgtgcagc
ttcacctgcttgtcgcgtgtccgccccatccgcagtgaccagtaccgcagcaagaaccct
ctgctcatcccacttctctatgacttccggcgcatgacggcccggcgccgcatcaaccgc
aagatgggctttcacgtcttgtacaagacaccgtgtgggctctgcctccgcaccatgcaa
gagattgagcgctacctgtttgagacagactgtgacttcctcttcctggagatgttttgc
ctggacccttacgtgctggtggaccgcaagttccagccctacaagcctttctactacatt
gctgacatcaccaagggcaaggaggacgtgcccctgtcctgtgtcaatgagatagacagc
acaccacccccacaggtggcttacagcaaggaacgcatccctgggaagggtgtctatatc
aacaccagctgggagttccttgtcggctgcgactgcaaagatggctgcagggacaaatcc
aaatgtgcctgtcaccagctgacagtccaagcgacaggctgcactcctggtgggcaaatc
aatcataattcaggctaccagtacaagcggctggacgaatgcctccccacaggggtctat
gagtgcaacaagagatgcaaatgcaacgtcaacatgtgcaccaaccgcctggtgcagcat
gggctccaggtccggctccagctcttcaagacacagaacaaaggctgggggatccgctgc
ctggatgacattgctaagggctcttttgtctgcatctacgcagggaaaatcctgacagat
gacttcgctgacaaggaagggctggagatgggtgatgagtactttgccaacctggaccac
attgagagcgtggagaactttaaggagggctatgagagcgatgccaaatgctcttctgac
agcagcggcgtggacctgaaggatgatgatgatgacaacacgggctcagaggagcaggag
gagtccaacgaagacagctctgatgacaactttggcaaggacgaagacttcagcaccaac
tcggtgtggcgcagctatgccactcgccgccagacccgaggacagaaggagaatggcctc
tcagagacagcttccaaggactcgggccttgcccggcaggtgagtcacgaggagagcgcc
gtggcagtctcctgtaagctgcccgtgtccgaagagacctccaagaacaaagtggcttcg
tggctgaactccaacagtatgactgacagcttccaggacaacgacagcgcatcctccttc
aagatgaacgaggctggggaggcaaaggccggcaagatggatgccccaggcgaaagggag
cgagcttccacctcagggcttgggggcttggatgcagaagggaagggacagaagaaggag
gaatcagaagaaacaaacaagttcccactgctgagcgagacgacaggcaggctgtacggc
tataaccccagcccaccgaagctggagggtgtccgcaggcccctgagcaagaccaccctg
catcagagcaggcggcagtcggcccccccgcagccctccactgacgacgtattgacgctc
tccagcagcactgacagtgagggggagaatgggcagacagcctcgggacaagcacaaggc
aatgccaatgacagcgatgacatccagaccatctcctccggctcggaggaagaagacgat
aaaaagaacccctcttctggcctcggtcctgtgaagagacaagtggcagtgaagtctacc
aggggctttgccctcaagtcaacacatggcattgctataaagtcaaccaaccttgcatcg
gctgacaagggtgagagtgcgccggtgcgaaggaccacccgccagttctatgacggggag
gaatcctgctacatcattgatgctaagcttgaaggaaacctcggccgctaccttaaccat
agctgtagccctaacctgtttgtgcagaacgtctttgtggacacccacgatctccgcttc
ccctgggtcgccttcttcgccagcaagaggatacgagctggcacggagctgacatgggac
tacaactacgaggtgggcagcgtggagggcaaggagcttctgtgctgctgcggggctatc
gaatgccgaggccggttgctgtga
DBGET
integrated database retrieval system
