KEGG   Alligator mississippiensis (American alligator): 102576197
Entry
102576197         CDS       T03087                                 
Name
(RefSeq) rano class II histocompatibility antigen, A beta chain
  KO
K06752  MHC class II antigen
Organism
amj  Alligator mississippiensis (American alligator)
Pathway
amj04145  Phagosome
amj04514  Cell adhesion molecules
amj04672  Intestinal immune network for IgA production
amj05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:amj00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    102576197
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    102576197
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    102576197
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    102576197
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:amj04147]
    102576197
Exosome [BR:amj04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   102576197
  Exosomal proteins of epithelial cells
   102576197
  Exosomal proteins of breast milk
   102576197
SSDB
Motif
Pfam: C1-set MHC_II_beta Ig_3 C2-set_2
Other DBs
NCBI-GeneID: 102576197
NCBI-ProteinID: XP_006260917
UniProt: A0A151N4Y5
LinkDB
Position
Un
AA seq 281 aa
MVSAGIAGAGCTGALIVIIALRVNKAHCTEPPEHFLLQENHECHYVNGTQQARYVERVIW
GQQEICYYDSDVGYYVARTEEGQWIAEYRNRLEYLSFLWASVEKFCSYSYRRFKSVAMDR
KVKPKIKIYPMKTESSHTPNLLVCSVTRFYPSGIRVKWLKNGQEHTGNVVSSELLPNGDW
TFQMHVKLKMVPRRGDVYACQVDHISLQTPMTLQWEVQTYSAKSKMIAGIVSLVLGLMLI
MVGLVLYLKNGEGCPWPAAAQSWDADMRSGISTTHLLEDCS
NT seq 846 nt   +upstreamnt  +downstreamnt
atggtttctgcagggatagctggggccggctgcactggggctctgatagtgataatagca
ttgcgagtcaacaaagctcattgcactgaacctccagagcacttcctgctgcaggagaat
cacgagtgtcactatgtgaatggcacacagcaggcgaggtacgtggagcgggtgatctgg
ggccagcaggagatctgctactatgacagcgatgtgggttactacgtggcccgcacagag
gagggtcaatggattgctgagtatcgcaacaggctggagtacttgagcttcttgtgggct
tcggtggagaagttctgcagctacagctacaggaggtttaagagcgttgcaatggacagg
aaagtgaagcccaaaataaaaatttaccccatgaaaacggagtcttcacacacccccaac
ctgctggtttgctccgtgacaaggttttacccctctggtattagggtcaagtggctcaaa
aatgggcaggagcatacaggcaatgttgtgtccagcgagctgctcccaaatggcgactgg
accttccaaatgcatgtgaagctgaaaatggtccctcggaggggagatgtctatgcctgc
caagtggaccatattagccttcaaactcccatgaccttgcagtgggaagtacagacttac
tctgccaagagcaaaatgattgctggaattgtcagcctggtactggggttgatgctcatc
atggtgggacttgtcctctacctgaagaatggggaaggttgcccgtggccagctgctgca
caatcgtgggatgctgatatgcgaagtggcatctcgacaacccacctgcttgaagactgc
agctaa

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