Alligator mississippiensis (American alligator): 102576548
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Entry
102576548 CDS
T03087
Symbol
PHC1
Name
(RefSeq) polyhomeotic homolog 1
KO
K11456
polyhomeotic-like protein 1
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
102576548 (PHC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amj03036
]
102576548 (PHC1)
Chromosome and associated proteins [BR:
amj03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
102576548 (PHC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHC2_SAM_assoc
zf-FCS_1
SAM_1
SAM_2
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
102576548
NCBI-ProteinID:
XP_006270660
LinkDB
All DBs
Position
Un
AA seq
1003 aa
AA seq
DB search
METESEQNSSSSTNGSSGSGGSTRPQISQMSLYERQAVQALQALQRQPNAAQYFHQFMLQ
QQLNTAQLHSLAAVQQATIAASRQASSPNTSTPQQTTTTQASINLATTSAAQLISRSQSV
SSPSTATLTQSVLLGNATSPPLNQSQAQMYLRPQLGNLLQVNRTLGRNVPLTSQLILMPN
GAVAAVQQEVPPAQSPGVHTDTDQVQNLAVRSQQTSATNAQLQGSAQKAALQGNSQTSGL
PQATSAGQTLAVAQASSGSTGQSLNLSQGAAGSNSVSGGMVAGGGSQATAGLSQANSAGP
ASSCQRKGTGVVQPLPVAAAQGVTVSQGSQTEMENAAAAAAKKAEADGSGQQTVGMNLTR
TATPAPSQTLISSATYTQIQPHSLIQQQQQIHLQKQVVIQQQIAIHHQQQFQHRQSQLLH
TATHLQLAQQQQQQQPPLTQQQQQQVPPLPQQALPPQSQQQAQTLVVQPMLQSQPQPIQL
QQDVSCQQATKSPVPIQSKPPVAPIKPPQLGAVKMSAAQQPPPHIPVQVVGSRQQGSAQA
QALGLAQITTAVPAPRGMPAVVQPVSQAHAASPSSQASTVTTSPQEAPPLTTGVNLAQVQ
GTAHMVKSTASPPVMAQVPGAFYMQSVQLPGKPQTLAVKRKADSEEEKEESPSATALLPA
KSSPVADSPKNIEEKSGLGEKSEPASSVTPSTPSSEAGSITTTASTPAPNLAMVTRQTGD
SKPPQAIVKPQILTHIIEGFVIQEGAEPFPVGCSQILKESEKPLQGGTPLGQSENQSSNS
SGGDGATAELDKKANLLKCEYCGNYAPASQFRGSKRFCSMTCAKRYNVSCSHQFRMQRKK
MKEFQEANYARVRRRGPRRSSSEIARAKIQGKRHRGQEDSSRGSDNSSYDEALSPTSPGP
LSVRASHGDRDLTNSSMAPPTPDLHGINPVFLSSNPSRWSVEEVYEFIASLQGCQEIAEE
FRSQEIDGQALLLLKEEHLMSAMNIKLGPALKICAKINVLKET
NT seq
3012 nt
NT seq
+upstream
nt +downstream
nt
atggagactgaaagtgagcagaactcctccagctccaccaatgggagttcagggtctgga
ggaagtactcgcccacagatttctcagatgtcgctgtatgagcgacaggcggtccaggcc
cttcaggccctgcagagacaacccaatgcagcccagtacttccaccagtttatgctccaa
cagcagcttaacactgcccaactccacagcctggctgctgtccagcaggctacaattgca
gctagcagacaagcaagctcgcccaacaccagcaccccccaacagaccaccaccacccag
gcctctatcaatctagccaccacatcagctgcccaactcatcagccgctcgcagagtgtg
agctcccccagcaccgccaccttgacgcagtctgtgctcctggggaatgccacctcaccg
cctctcaaccaatcgcaggcccagatgtacctccggccgcagctggggaacctgttgcag
gtgaaccggaccttgggccgcaatgtgcctcttacctcccagctcatcctgatgcctaac
ggggctgtggctgctgtccagcaggaggtgccacccgctcagtctcctggggtccacaca
gacacagaccaggtgcagaatttggctgtgaggagccaacagacctcagccactaatgcc
cagcttcagggctctgctcagaaggcagccttacaaggaaactcccagacttcgggccta
ccacaggccaccagtgctggccagaccttggcagtagcacaagcctcttccggtagtaca
ggccagtctctcaaccttagtcagggggcagcaggcagtaacagtgtctctgggggtatg
gtggcaggtggcgggagccaagccactgcaggtctaagccaggcaaactcagctggccct
gccagcagctgccagaggaaaggtactggggtggttcagccactgccagttgcagctgcc
cagggagtaacagtgagtcagggaagccagacagagatggagaatgcagcagcagcagca
gcaaagaaagctgaagcagatggcagcgggcagcaaacagtgggcatgaacctgaccagg
acagctaccccagcgcccagccagaccttgatcagctccgccacctacacgcagatccag
ccccactcgctgatccagcagcaacagcagattcacctgcagaagcaagtggtgatccag
cagcagattgccattcatcaccagcagcaatttcagcaccgccaatcccagctcctccat
accgccacccacctccagctggctcagcagcagcagcaacaacaaccacctctaacccag
cagcagcaacagcaagtgccacccttgccacagcaggctctgccacctcaaagtcagcag
caggctcagacccttgtggttcagcccatgctgcagtcccagcctcagcccatacagctc
cagcaggatgtctcatgtcagcaagctaccaagtcgcctgttcccattcagtccaagccc
cctgtggcccccatcaaacctcctcagctgggggctgtcaaaatgtcagcagcgcagcag
cccccaccccacatcccagtgcaagtagtggggagccgccagcagggctcagcccaagcc
caggccttgggtttggctcagatcaccaccgcagtgcctgctccccgggggatgccagcc
gtggtccagcctgtttctcaagcccatgctgcttccccatcctcccaggcatccactgtt
acaacttccccacaggaagcccctcccctcactactggggtcaacttggctcaagttcaa
ggcacggcgcacatggtgaagagcacagcttcaccaccagtcatggctcaggtgccagga
gcattctacatgcagtctgtccagttgccaggcaaaccccaaaccttggcagtgaagcgc
aaagcagattcagaggaagagaaggaggagtcacccagtgctactgcactcttgcctgcc
aagtcctctcctgtagcagacagcccaaaaaacattgaggagaagagtggccttggagag
aaatctgagcctgcctccagtgtaaccccaagcaccccctccagtgaagcagggtccatt
accaccactgcctctactcctgcccccaacttggcaatggtgacacgacagactggagac
tccaaacccccacaggccattgtgaagccccaaattctaacacacatcattgaaggcttt
gttattcaggaaggggcggagccgttcccggtgggatgttctcagatcctcaaagagtct
gagaagccactgcaaggaggaacacccttggggcagagtgagaaccagtccagcaactcc
tcgggaggagacggtgcaactgcagagctggacaagaaagcaaacctactgaagtgtgag
tactgtgggaattatgccccagccagccagttccgtggctccaagaggttttgctccatg
acctgtgcaaaaaggtacaatgtgagttgcagccatcagtttcggatgcagaggaagaag
atgaaggaattccaggaagctaactatgcccgtgtgcgtcggcgtgggcctcggcgcagc
agctcggagattgctcgagccaaaatccagggcaagcggcaccggggccaggaagactcc
agtcgaggctctgacaactccagctatgatgaggctttgtctccaacatcccctggaccc
ctgtcagtgagggccagtcatggagaccgggaccttaccaactccagcatggccccacct
acccctgacctacatggcatcaacccagtgttcctgtccagtaaccccagccgctggagc
gtggaggaggtgtatgagttcatcgcatccctgcagggctgccaggagattgcagaggag
ttccgctcacaggagattgatggccaggctctgttgctgctgaaggaggagcacctgatg
agcgccatgaacatcaagctgggccctgccctcaagatttgcgccaagatcaatgtcctc
aaagagacttaa
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