Alligator mississippiensis (American alligator): 102577020
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Entry
102577020 CDS
T03087
Symbol
SCN4A
Name
(RefSeq) sodium voltage-gated channel alpha subunit 4
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
amj
Alligator mississippiensis (American alligator)
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
amj04040
]
102577020 (SCN4A)
Ion channels [BR:
amj04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
102577020 (SCN4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
FUT8_N_cat
Lustrin_cystein
Motif
Other DBs
NCBI-GeneID:
102577020
NCBI-ProteinID:
XP_019331363
LinkDB
All DBs
Position
Un
AA seq
1828 aa
AA seq
DB search
MASPPYLPGPDNLRLFTRESLAAIEQRIAEEEALKLKRQHVEVLDEEERKARSDLEAGKS
LPLIYGDPPPELIGVPLEDLDPFYRDQKTFIVLNKGKSIFRFSATPAVYLLGPFNPIRRG
AIKVLIHSLFSMFIMITILTNCVFMTMSDPPPWSKNVEYTFTGIYTFESMIKILARGFCI
DSFTFLRDPWNWLDFSVIVMAYTTEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGAL
IQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRHKCVRWPPPFNETIPENIFGMDNDTF
VNATLYGNLTGSGNNTFDYDAYMNNEGNFYFLEGALDALLCGNSSDAGKCPEGYECMKAG
RNPNYGYTSYDTFSWAFLALFRLMTQDYWENLFQLTLRAAGKTYMIFFVLIIFLGSFYLI
NLILAVVAMAYAEQNDATALEIQQKEEEYQKLLEQLKKHQEEQAKMLKDRKLSACSATQK
KKGDSDQDADSDQDKLKDCNGRVVPKVVLERSATVRERNPSDDQDKVDYNHLAVGPQDGP
SLQKRAESVTSIISSTMEELEEAHRKCPPWWYKFAKTFLVWDCCLPWLKLKAFVKLIVLD
PFVDLGITICIVLNTLFMAMEHYPMTEEFENVLTVGNLVFTGIFTAEMVLKLIALDPYDY
FQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSV
GALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKISADCTLPRWHMHDFFHAFLIVFRI
LCGEWIETMWDCMEVAGQAMCLLVFMLVMVIGNLVVLNLFLALLLSSFSADSLAASDDDG
EMNNLQIAIGRITRGIDFVKKTVLMLLHRQWKEKKDPDEEQEESKTDNYVLNHMDSGQDS
KSDFMDGVAGKEHISVDHVDHMNFINNPNLTVQVPIASEESDLYDETSTQSDTEDTKKPL
SHGSTSSMGSTVDYKPPVAEVEEVVEEATEGTEPENCFTEACVQRFPFLYVDITTDKGKI
WWNLRKTCFKIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKVIRTILEYADKIFSYVF
VIEMLLKWVAYGFKVYFTNAWCWLDFLIVDVSIISLTANWLGYSELGAIKSLRTLRALRP
LRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYYRCINTTTDE
LFEIEVVNNKSDCLALLDTSQVRWVNVKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDS
REIEEQPLYETNLYMYIYFVIFIIFGAFFTLNLFIGVIIDNFNQQKKKFGGKDIFMTEEQ
KKYYNAMKKLGSKKPQKPIPRPQNQIQGVVYDFVTKQVFDITIMVLICLNMVTMMVETDD
QSEAKIEILQTVNLIFIIIFTGECVLKMFALRYYYFTIGWNIFDFVVVILSIVGLVLSDV
ISKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIY
SIFGMSNFAYVKKESGIDDIFNFETFGNSIICLFQITTSAGWDGLLNPILNSGPPDCDPH
LENPGSSVKGNCGNPSMGICFFCSYIIISFLIVVNMYIAIILENFNVATEESSEPLCEDD
FEMFYETWEKFDPDATQFITYSTLSDFVDTLQEPLKIAKPNKIKLVTMDLPMVPGDKIHC
LDILFALTKEVLGDSGEMDALKETMEEKFMAANPSKVSYEPITTTLKRKHEEVCAIKIQR
AFRRYLLKRSVKQASYLYRHSKEEDTLMEEAPEKEGLIASKMNWNYGTGEVETAPTLSLK
PVLSSETPGAPSEAKKLDEKRNVKESFV
NT seq
5487 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcccgccatacttaccaggtccagacaacctccgcctttttacccgcgaatct
cttgctgcaatagaacagcggattgctgaggaggaagcgctcaagttaaagcggcagcat
gtggaagtgctggacgaagaagaacgaaaggcccgtagtgatctagaagctggaaagagc
ctcccacttatttatggggacccacctccagaactcattggggtgcctctagaagaccta
gaccctttctacagagatcaaaagacattcatagtcctaaacaaagggaaatcaatcttc
cgattctcagcaacccctgctgtctacttactgggacccttcaaccccatcagaagaggt
gccatcaaagtgcttatacattcattattcagtatgttcatcatgatcaccattttaacc
aactgtgtgtttatgacgatgagcgaccccccgccgtggtccaagaatgtggaatacacc
ttcactggaatatatacctttgagtccatgataaagatcctagcaagagggttttgcatt
gacagttttacattcctgcgagatccgtggaactggctggatttcagtgtcattgttatg
gcttataccacagagtttgtggatttgggaaatatctctgctttaagaacgttccgtgtc
ctccgtgcactgaaaacgattacagtaattccaggactgaagaccattgttggagccttg
atacagtctgtgaagaagctctccgatgtcatgatactcacagtcttctgtctcagcgtg
tttgcacttattggtcttcagttgttcatgggcaaccttcggcacaaatgtgtcaggtgg
ccaccccctttcaatgagactattccagagaacatctttggaatggacaatgacaccttt
gtgaatgcaacactctatggcaacctgactggatctggtaacaataccttcgattatgat
gcttatatgaacaatgaagggaatttctacttcctggagggagcgcttgatgccctgctc
tgtgggaatagcagcgatgctgggaagtgccctgaaggctatgaatgtatgaaagcggga
aggaacccaaactatggctacactagttatgacacatttagctgggctttccttgctctc
ttccgcctcatgactcaggattactgggagaacctcttccagctgactctacgtgcagct
gggaaaacttacatgatcttctttgttctgattatattccttggttccttctacctcatc
aacctgatcctggctgtggtagccatggcatatgcagagcaaaatgatgctactgcactg
gaaatacagcagaaggaggaggagtatcagaagcttctggaacagctgaaaaagcaccag
gaggaacaagcaaaaatgttaaaagaccgtaagttaagtgcttgctctgcgactcagaaa
aagaagggcgactcggaccaagatgcagacagcgaccaagacaaattgaaagactgcaat
ggcagagtcgtccccaaggttgtgctggagcgatctgctacagtaagggaacgcaatccc
agcgatgaccaagataaagtggattataaccacctggcagtgggcccacaagatggtccc
agccttcagaagagagcagagagtgttaccagtattatctctagcaccatggaagagtta
gaggaagctcacaggaagtgcccaccctggtggtataaatttgccaaaacgttccttgtc
tgggactgctgtcttccgtggctgaaactgaaggcgtttgttaagctgatagtgctggac
ccttttgtcgacctggggatcaccatctgcatagtgctcaacacactgttcatggccatg
gaacactatccaatgactgaagagtttgagaatgtgctgactgtggggaacctggtcttt
actgggatcttcactgctgagatggttttaaagctcatagctttggacccatatgactac
ttccagcagggttggaacatatttgacagtatcatcgtcaccctgagcttggtggagctg
ggcctggctaatgtgcaggggctctctgtgctccgatctttccgtctgctcagagttttc
aagcttgccaagtcctggccaaccctcaacatgctcataaagatcataggcaactccgtg
ggcgctctcgggaacctcacccttgtgctggccatcattgtcttcatctttgctgttgtg
ggcatgcagctgtttgggaagagctacaaggaatgtgtgtgcaagatctctgctgactgc
acactgccccgctggcacatgcatgacttcttccatgccttcctcattgtcttccgcatc
ctgtgcggagagtggattgagaccatgtgggactgcatggaggtggcaggccaagccatg
tgcctcctcgtcttcatgttggtgatggtcattgggaacctcgtggtcctgaacctgttc
ttagctttgctgctgagttccttcagtgctgatagccttgcagcttctgatgatgatgga
gagatgaacaatttgcagattgctattggcaggatcactagggggattgactttgtaaag
aaaactgtcctaatgctacttcacaggcagtggaaggagaagaaagacccggatgaggag
caagaggagagtaagacagacaactatgtcctaaaccatatggactctggccaggattcc
aagtcggattttatggatggagtagctgggaaagagcatatctctgtagatcatgtggat
cacatgaatttcattaataaccccaatctgactgtccaagtgccaattgcctcagaggaa
tctgacctctacgatgaaacaagcacccagtctgacacagaagacaccaagaagccgctg
tcccacgggagcacatcatccatgggtagcaccgtagattacaagccaccagtagctgag
gtggaggaggttgtggaggaggctacggagggcaccgagcctgaaaactgcttcactgag
gcttgtgtgcagaggtttcccttcctttatgttgacattacaactgacaaagggaaaata
tggtggaaccttcggaaaacctgcttcaagatcgttgaacacaactggtttgagaccttc
atcatctttatgatcctcctcagcagcggagccctggcttttgaagacatctatatcgag
cagcgtaaggtcatacgtaccatcctggaatatgccgacaagatcttctcctatgtcttc
gtcattgagatgctgctcaagtgggtggcctatggcttcaaagtatatttcaccaatgcc
tggtgctggctggattttctcattgtcgatgtttccattatcagcttgacagcaaactgg
ttgggatactcagaactgggagccatcaagtcactgaggactctgagagctttgagacct
ttgcgagctctgtccagatttgaaggcatgagggtagtagtaaatgccctgctgggagcc
atcccctccattatgaatgtcttgctggtctgtctgatcttctggctgatattcagcatc
atgggtgtgaacctgtttgcggggaaatactaccggtgcatcaacaccaccacagacgag
ctctttgaaatcgaagtggtgaataataaaagcgactgcttggccctccttgataccagc
caggtccgatgggtgaatgtcaaggtcaactttgacaatgttgggttaggctacctctct
ctgctgcaggtggccacctttaaaggctggatggacatcatgtatgcagcggtggactcc
cgtgagattgaagagcagccactgtatgagaccaacctctacatgtacatctacttcgtc
atcttcatcatctttggtgcctttttcactctcaacctcttcattggggtcatcattgat
aactttaatcagcaaaagaaaaagtttggaggaaaggacatcttcatgacagaagagcag
aagaaatactataatgccatgaaaaagctgggatcaaagaaaccccagaagccaatcccc
aggccccagaaccaaattcaaggcgtggtgtatgactttgtaacaaagcaagtgtttgac
ataactatcatggtcctgatttgtcttaacatggtgaccatgatggttgaaacagatgac
caaagtgaagccaaaattgaaattctccagactgtcaacctgattttcatcatcatcttc
actggcgagtgtgtgctcaaaatgtttgccctgcgctactattacttcaccattggttgg
aatatctttgactttgtggtggtcattctctccattgtaggtctcgtcctttcagacgtc
atttcgaaatattttgtgtcacccaccctctttagggtgattcggctggccaggattggg
cgtgttcttcgtctaatcagaggagcaaaaggcatccggactctgctctttgccctcatg
atgtccctaccagctttgttcaacattggactcctgctcttcctggtgatgtttatctac
tctatcttcgggatgtccaactttgcctatgtgaagaaggagtctgggattgatgacatc
ttcaactttgaaacttttggtaatagcatcatttgtttgttccaaatcactacatcagca
ggatgggatggcctcctcaaccctatcctgaacagcggccctccagactgcgacccccat
ttggagaaccctggcagttcagtgaaaggaaactgtgggaatccatctatgggcatctgc
tttttctgtagctatatcatcatttccttcctgattgttgtgaacatgtatattgccatc
attcttgagaacttcaacgttgctacagaggagagcagcgaacccctttgtgaagatgac
tttgagatgttttatgaaacatgggagaaatttgatccggatgccacccagtttatcacg
tacagcaccttatctgactttgttgacaccttacaagagccacttaaaattgccaagcca
aacaagattaaattggtcaccatggatttaccaatggtccccggggacaaaatccactgt
ttggacattctgtttgctctgacaaaagaagtcttgggtgactcaggagaaatggatgct
ttgaaagaaacaatggaggagaaatttatggctgcaaatccatccaaggtttcctatgaa
cccatcactacaactttgaaaagaaaacatgaagaagtatgtgccataaaaatccaaaga
gctttccgcaggtaccttttaaagcggtccgtgaaacaagcctcttacctctacaggcat
agtaaagaggaggacaccctaatggaagaagcaccagagaaagaaggactgatcgcaagc
aaaatgaactggaattatgggacaggagaagtagaaacagccccaaccctgtctcttaaa
ccagttctaagttcagagactccgggtgctcccagtgaagcaaaaaaattggatgagaaa
cgtaatgtgaaagaatcatttgtataa
DBGET
integrated database retrieval system
