Alligator mississippiensis (American alligator): 106737192
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Entry
106737192 CDS
T03087
Symbol
HMGCS2
Name
(RefSeq) 3-hydroxy-3-methylglutaryl-CoA synthase 2
KO
K01641
hydroxymethylglutaryl-CoA synthase [EC:
2.3.3.10
]
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj00280
Valine, leucine and isoleucine degradation
amj00650
Butanoate metabolism
amj00900
Terpenoid backbone biosynthesis
amj01100
Metabolic pathways
amj03320
PPAR signaling pathway
Module
amj_M00095
C5 isoprenoid biosynthesis, mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
106737192 (HMGCS2)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
106737192 (HMGCS2)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
106737192 (HMGCS2)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
106737192 (HMGCS2)
Enzymes [BR:
amj01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.10 hydroxymethylglutaryl-CoA synthase
106737192 (HMGCS2)
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Motif
Pfam:
HMG_CoA_synt_C
HMG_CoA_synt_N
ACP_syn_III
DUF627
Motif
Other DBs
NCBI-GeneID:
106737192
NCBI-ProteinID:
XP_006276790
LinkDB
All DBs
Position
Un
AA seq
512 aa
AA seq
DB search
MFRFFSRSKRYLQVKRVLQRQEQPSWPAHHVAAAQKGSFSTIPMDRSSRSDLWPKDVGIQ
ALEVYFPSQYVEQVELEKYDGVEAGKYTQGLGQRQMGFCSAHEDINSLCLTVVQRLVERS
HLSWDSIGRLEVGTETIIDKSKAVKTVLMQLFQDSGNTDVEGIDTTNACYGGTASLFNAA
DWVESSSWDGRYALVVCGDIAVYATGNARPTGGAGAVAMLVGPNAPLALERGLRGTHMEN
AYDFYKPDLASEYPVVDGKLSIQCYFRALDQCYAVYRKKIQSQWQKEGITKPFTMEDFQF
IIFHTPFCKLVQKSVGRLLLNDFLAAPKPDTESGIYKGLQSFRGKKLEDTYSDKDVEKAF
QKASLEIFSQKTKPSLLLSSRNGNMYTPSVYGCLASLLAQCSAQQLAGSRIGAFSYGSGL
AASLFSLRVSQDAAPGSSLDKLVSSLSDLQTRLDSRKCIPPEEFAQIMKLREDTHHLANH
TPHGSKDNLFPGTWYLQQIDDKYRRAYARKPL
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgttccgcttcttcagtcgcagcaagcgctatttgcaagtgaagcgagtgctgcagaga
caggagcagccctcatggccagcacaccatgtggcagcagcccagaagggcagtttttcc
accatccctatggatcgctcatcccgatcagacttgtggccaaaggatgtgggcatacag
gccttggaggtgtacttcccttcacagtatgtagagcaggtggaattggagaagtatgat
ggtgtggaagcagggaagtacacgcaaggcctgggccagaggcaaatgggcttctgctca
gcccacgaggacattaactccctctgcctgactgtggtgcagaggctggtggagcgcagc
cacctctcctgggactccatcggccgactggaggttggcacagagactattattgacaag
tccaaggcagtcaagacagtcctcatgcagctcttccaggactcggggaacactgatgtt
gaaggcatcgacaccactaatgcctgctatggtggcacagcctccctcttcaatgctgcc
gactgggtggagtccagctcctgggatggccgatatgctttggtggtctgcggtgacatt
gctgtttatgccactgggaatgcccgtcccacaggaggggcaggagctgtagccatgctg
gttggcccgaatgcccctctggcactagagagaggtcttcgaggaacccacatggagaat
gcctatgatttctacaagccagacttggcttcagagtatcctgtggtagatgggaaactc
tcaatccagtgctatttccgggcactggatcaatgctatgctgtctatcgcaagaaaatc
cagagccagtggcagaaagaggggatcaccaaaccttttaccatggaagacttccagttc
ataatcttccacacacccttctgcaaactggtacagaagtctgtgggacggttgctgctc
aatgacttcctggcagctcccaaacctgacactgagagtggcatctacaaagggctgcag
agcttccgtggtaaaaagctagaagacacttactctgacaaggatgtggagaaggcattt
caaaaagcaagcctggagattttcagccagaaaaccaagccctcactgctcctttcctct
cgcaatggcaacatgtacaccccttctgtctacgggtgtctcgcctctctccttgcacaa
tgttctgcacagcagctggctggctcaaggatcggggccttctcttatggctcaggattg
gctgcaagcttgttctcccttcgagtctcacaggatgctgccccaggttcctccctggac
aagctggtttccagcctctctgacctgcagactcgcctggattcccggaagtgcatcccg
cctgaggagtttgcacagatcatgaagttgagggaggacacccatcacttggcaaaccac
actccccatggctccaaggacaaccttttcccaggcacctggtacctgcagcaaattgat
gacaaataccgccgggcatatgccaggaaaccactttaa
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