Alligator mississippiensis (American alligator): 106738123
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Entry
106738123 CDS
T03087
Symbol
NTHL1
Name
(RefSeq) nth like DNA glycosylase 1
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
amj
Alligator mississippiensis (American alligator)
Pathway
amj03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
amj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
106738123 (NTHL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amj03400
]
106738123 (NTHL1)
Enzymes [BR:
amj01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
106738123 (NTHL1)
DNA repair and recombination proteins [BR:
amj03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
106738123 (NTHL1)
Prokaryotic type
106738123 (NTHL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
Ogg-HhH
HHH_5
Motif
Other DBs
NCBI-GeneID:
106738123
NCBI-ProteinID:
XP_019350081
LinkDB
All DBs
Position
Un
AA seq
270 aa
AA seq
DB search
MSAAASGGRRVTRQLSGNAGRRLSEAAVEPATDPESRPAKRLRCGSGSGRRRRFGRPPAP
APSGGGPGEPEGSLTLPLPCPAPQVRRYQVLLSLMLSSQTKDEVTSAAMLRLREHGLTVD
NVLQTDDAALGKLIYPVGFWRNKVKYIKQTTAILKEQYGSDIPRTVKELVQLPGVGPKMA
HLAMNIAWNDVSGIGVDTHVHRIANRLKWVKKETKTPEATRVALEDWLPRDLWSEINWLL
VGFGQQTCLPVGPRCADCLNQALCPAAKRC
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcggccgcgtcgggggggcgccgcgtcacccggcagctgagcggtaacgccggc
cggcggctctccgaggcggccgtcgagcccgcgacggaccccgagagccgcccggcgaag
cgcttgcgttgcgggtccgggtctgggcggaggaggaggttcgggcggcccccggcccca
gcgccttcagggggtggccctggcgagcccgaggggtctctaacgctgcctctgccctgc
cctgctccccaggtgaggcgctaccaggttctgctgtcgctgatgctctccagccagacc
aaggacgaggtgacctcggcggccatgctgcgcctgagggagcacggcctcaccgtggac
aacgttttgcagacagatgacgcagctctcgggaaactcatttaccccgtgggcttctgg
aggaacaaggtgaagtacatcaagcagacgaccgcgatcctgaaggagcagtacgggagc
gacatccccaggacggtcaaggagctggtgcagctgccgggcgtggggccgaagatggcc
cacttggccatgaacatcgcctggaacgatgtatctgggataggtgtggacacccacgtg
caccggattgccaaccggctgaagtgggtgaagaaggaaaccaaaactcctgaggcgacc
cgtgtggcactggaggactggctgcccagggacctctggagcgagatcaactggctcctg
gtaggctttggccagcagacctgcctgcccgtgggcccgcgctgtgcagactgcctcaac
caggccctttgccctgcggcgaagaggtgctga
DBGET
integrated database retrieval system
