KEGG   Ailuropoda melanoleuca (giant panda): 100464279
Entry
100464279         CDS       T01329                                 
Name
(RefSeq) HLA class II histocompatibility antigen, DR alpha chain
  KO
K06752  MHC class II antigen
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
aml04145  Phagosome
aml04514  Cell adhesion molecules
aml04612  Antigen processing and presentation
aml04640  Hematopoietic cell lineage
aml04658  Th1 and Th2 cell differentiation
aml04659  Th17 cell differentiation
aml04672  Intestinal immune network for IgA production
aml04940  Type I diabetes mellitus
aml05140  Leishmaniasis
aml05145  Toxoplasmosis
aml05150  Staphylococcus aureus infection
aml05152  Tuberculosis
aml05164  Influenza A
aml05166  Human T-cell leukemia virus 1 infection
aml05168  Herpes simplex virus 1 infection
aml05169  Epstein-Barr virus infection
aml05310  Asthma
aml05320  Autoimmune thyroid disease
aml05321  Inflammatory bowel disease
aml05322  Systemic lupus erythematosus
aml05323  Rheumatoid arthritis
aml05330  Allograft rejection
aml05332  Graft-versus-host disease
aml05416  Viral myocarditis
Brite
KEGG Orthology (KO) [BR:aml00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    100464279
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    100464279
 09150 Organismal Systems
  09151 Immune system
   04640 Hematopoietic cell lineage
    100464279
   04612 Antigen processing and presentation
    100464279
   04658 Th1 and Th2 cell differentiation
    100464279
   04659 Th17 cell differentiation
    100464279
   04672 Intestinal immune network for IgA production
    100464279
 09160 Human Diseases
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    100464279
   05164 Influenza A
    100464279
   05168 Herpes simplex virus 1 infection
    100464279
   05169 Epstein-Barr virus infection
    100464279
  09171 Infectious disease: bacterial
   05150 Staphylococcus aureus infection
    100464279
   05152 Tuberculosis
    100464279
  09174 Infectious disease: parasitic
   05145 Toxoplasmosis
    100464279
   05140 Leishmaniasis
    100464279
  09163 Immune disease
   05310 Asthma
    100464279
   05322 Systemic lupus erythematosus
    100464279
   05323 Rheumatoid arthritis
    100464279
   05320 Autoimmune thyroid disease
    100464279
   05321 Inflammatory bowel disease
    100464279
   05330 Allograft rejection
    100464279
   05332 Graft-versus-host disease
    100464279
  09166 Cardiovascular disease
   05416 Viral myocarditis
    100464279
  09167 Endocrine and metabolic disease
   04940 Type I diabetes mellitus
    100464279
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:aml04147]
    100464279
Exosome [BR:aml04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100464279
  Exosomal proteins of epithelial cells
   100464279
  Exosomal proteins of breast milk
   100464279
SSDB
Motif
Pfam: MHC_II_alpha C1-set Ig_3 Ig_2 PA14
Other DBs
NCBI-GeneID: 100464279
NCBI-ProteinID: XP_002928296
Ensembl: ENSAMEG00000002390
UniProt: G1L6J1
LinkDB
Position
5:27826872..27831913
AA seq 254 aa
MAVSGVPVLGFFIMALLMGPQESQAIKEDHVIIQAEFYMTPDPSGEYMFDFDGDEIFHVD
LEKKETVWRLEEFGRFASFEAQGALANIAVDKANLDIMIKRSNHTPNTNVPPEVTVLSNT
PVELGEPNTLICFIDKFSPPVINVTWLRNGNPVTTGVSETVFLPREDHLFRKFHYLPFLP
SADDVYDCKVEHWGLDKPLLKHWEFEAPTPLPETTENVVCALGLVVGLVGIIVGTVFIIK
GMRKVNAGERRGPL
NT seq 765 nt   +upstreamnt  +downstreamnt
atggctgtaagtggagtcccagtgctaggatttttcatcatggctttactgatgggtccc
caggaatcacaggctatcaaagaggaccatgtgatcatccaggctgagttctatatgacc
cctgacccgtcaggcgagtatatgtttgacttcgatggtgatgagattttccatgtggat
ttggaaaagaaggagacagtgtggcggctggaagaatttggacgttttgccagttttgag
gcccagggtgccttggccaacatagctgtggacaaagctaacctggacatcatgataaag
cgctccaaccacaccccgaacaccaatgtacctccagaggtgactgtgctctcaaacacc
cctgtggaactgggagagcccaacaccctcatctgtttcatcgacaagttctccccaccg
gtgatcaatgtcacatggcttcgaaatggaaaccctgtcaccacaggagtgtcagagaca
gtcttcctgcccagggaagaccaccttttccgcaagttccactatctccccttcctgccc
tcagccgatgatgtctatgactgcaaggtggagcactggggtttggacaagcctcttctc
aaacactgggagtttgaagcaccaactcccctcccagagacaacagagaatgtggtgtgt
gctctgggcctggttgtgggtctggtgggcatcattgttgggaccgtcttcatcatcaag
ggcatgcgcaaggtcaatgctggtgaacgccgagggcctctgtga

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