Ailuropoda melanoleuca (giant panda): 100465724 Help Entry 100465724         CDS       T01329                                  Symbol THBS1 Name (RefSeq) thrombospondin-1   KO K16857   thrombospondin 1 Organism aml  Ailuropoda melanoleuca (giant panda) Pathway aml04015   Rap1 signaling pathway aml04115   p53 signaling pathway aml04145   Phagosome aml04148   Efferocytosis aml04151   PI3K-Akt signaling pathway aml04350   TGF-beta signaling pathway aml04510   Focal adhesion aml04512   ECM-receptor interaction aml04820   Cytoskeleton in muscle cells aml05144   Malaria aml05165   Human papillomavirus infection aml05205   Proteoglycans in cancer aml05206   MicroRNAs in cancer aml05219   Bladder cancer Brite KEGG Orthology (KO) [BR:aml00001]  09130 Environmental Information Processing   09132 Signal transduction    04015 Rap1 signaling pathway     100465724 (THBS1)    04350 TGF-beta signaling pathway     100465724 (THBS1)    04151 PI3K-Akt signaling pathway     100465724 (THBS1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     100465724 (THBS1)  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     100465724 (THBS1)    04148 Efferocytosis     100465724 (THBS1)   09143 Cell growth and death    04115 p53 signaling pathway     100465724 (THBS1)   09144 Cellular community - eukaryotes    04510 Focal adhesion     100465724 (THBS1)   09142 Cell motility    04820 Cytoskeleton in muscle cells     100465724 (THBS1)  09160 Human Diseases   09161 Cancer: overview    05206 MicroRNAs in cancer     100465724 (THBS1)    05205 Proteoglycans in cancer     100465724 (THBS1)   09162 Cancer: specific types    05219 Bladder cancer     100465724 (THBS1)   09172 Infectious disease: viral    05165 Human papillomavirus infection     100465724 (THBS1)   09174 Infectious disease: parasitic    05144 Malaria     100465724 (THBS1)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:aml04131]     100465724 (THBS1)   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:aml00536]     100465724 (THBS1) Membrane trafficking [BR:aml04131]  Endocytosis   Phagocytosis    Opsonins     100465724 (THBS1) Glycosaminoglycan binding proteins [BR:aml00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    100465724 (THBS1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TSP_C TSP_3 TSP_1 TSP1_spondin VWC TSP1_CFP_C EGF_3 cEGF TSP1_ADAMTS EGF_CA Laminin_G_3 Laminin_G_2 TSP1_CCN EGF Motif Other DBs NCBI-GeneID:  100465724 NCBI-ProteinID:  XP_002913278 Ensembl:  ENSAMEG00000017287 LinkDB All DBs Position 5:complement(64978294..64993833) Genome browser AA seq 1170 aa AA seqDB search MGLAWGLSVLFLLHACGSSRIPESGGDNSVFDIFELTGAARKGSGRRLVKGPDPSSPAFR IEDANLIPPVPDDKFQDLVDAVRAEKGFLLLASLRQMKKTRGTLLAIERKDHSGQVFSVV SNGKAGTLDLSLTVQGMQHVVSVEEALLATGQWKSITLFVQEDRAQLYIDCEKMENAELD VPIQSIFTRDLASVARLRIAKGGVNDHFQGVLQNVRFVFGTTPEAILRNKGCSSSTNVLL TLDNNVVNGSSPAIRTNYIGHKTKDLQAICGISCDELSSMVLELRGLRTIVTTLQDSIRK VTEENKELAIELRRPPLCYHNGVQYRNNEEWTVDSCTECRCQNSVTICKKVSCPIMPCSN ATVPDGECCPRCWPSDSADDGWSPWSEWTSCSATCGNGIQQRGRSCDSLNNRCEGSSVQT RTCHIQECDKRFKQDGGWSHWSPWSSCSVTCGDGVITRIRLCNSPSPQMNGKPCEGEARE TKACTKDACPINGGWGPWSLWDLCSVTCGGGVQKRSRLCNNPTPQFGGKDCVGDTTERQT CNKQDCPIDGCLSNPCFAGVKCTSYADGSWKCGACPPGYSGNGVQCEDVDECKEVPDACF NHNGEHRCENTDPGYNCLPCPPRFTGPQPFGRGVDYATANKQVCKPRNPCTDGTHDCNKN AKCSYLGHYSDPMYRCECKPGYAGNGIICGEDTDLDGWPNEDLVCVANATYHCKKDNCPN LPNSGQEDYDKDGIGDACDDDDDNDKIPDDRDNCPFHYNPAQYDYDRDDVGDRCDNCPYN HNPDQADTDNNGEGDACAADIDGDGILNERDNCQYVYNVDQRDTDMDGVGDQCDNCPLEH NPDQLDSDSDRIGDTCDNNQDIDEDGHQNNLDNCPYVPNANQADHDKDGKGDACDHDDDN DGIPDDRDNCRLVPNPDQKDSDGDGRGDACKDDFDHDNVPDIDDICPENIDISETDFRRF QMIPLDPKGTSQNDPNWVVRHQGKELVQTVNCDPGLAVGYDEFNAVDFSGTFFINTERDD DYAGFVFGYQSSSRFYVVMWKQVTQSYWDTNPTRAQGYSGLSVKVVNSTTGPGEHLRNAL WHTGNTPGQVRTLWHDPRHIGWKDFTAYRWRLSHRPKTGFIRVVMYEGKKIMADSGPIYD KTYAGGRLGLFVFSQEMVFFSDLKYECRDS NT seq 3513 nt NT seq  +upstreamnt  +downstreamnt atggggctggcctggggactcagtgtcctattcctgttgcatgcgtgtggttccagccgc attccagagtctgggggagacaacagcgtgttcgacatctttgaactcaccggggctgcc cgtaagggctctgggcgccgactggtgaagggtcctgacccttccagcccagctttccgc atcgaggatgccaacctaatcccccctgtgcctgatgacaagttccaagacctagtggat gccgtgcgggcagagaaaggcttccttctcttggcctccctgaggcagatgaagaagacc cgaggcactctgctggccatagaacggaaggaccactcgggccaggtcttcagtgtggtc tccaatggcaaagcgggcaccctggacctgagcctgaccgtgcaggggatgcagcatgtg gtgtcagtggaggaggcgctcctggccaccggccagtggaagagcatcaccctgttcgtg caggaggaccgggcccagctgtacatcgactgtgagaagatggagaacgcagagctggat gtccccatccagagcatcttcaccagggacctggccagcgtggccagactccgcattgcc aaaggaggggtcaatgaccatttccagggggtgctgcagaacgtgaggtttgtcttcgga accacaccagaagccatcctcaggaacaaaggctgctccagctcgaccaatgtccttctt accctagacaacaatgtggtaaacggctccagccctgccatccgcactaactacatcggc cacaagacgaaggatctgcaagccatctgcggcatctcttgtgacgagctgtccagcatg gtcctggagttgaggggcctgcgcaccattgtcaccacactccaggacagcattcgcaaa gtgactgaagagaacaaagagttggccattgagctgaggaggcctccactctgctaccac aatggagttcagtacaggaataatgaggaatggactgttgatagctgcacggagtgccgc tgtcagaactctgttaccatctgtaagaaagtgtcctgccccatcatgccctgctccaac gccacagtccccgatggagaatgctgcccacggtgttggcccagcgactctgcggatgac ggctggtccccgtggtctgagtggacctcctgctctgcgacctgtggcaatggaatccag cagcgcggtcgctcctgtgacagtctcaacaaccgatgtgagggctcctccgtccagacg cggacctgccacattcaggagtgcgataagagatttaaacaggatggcggctggagccac tggtccccgtggtcatcttgttccgtgacctgcggcgatggtgtgatcacaagaattcga ctctgcaattctccgagcccccagatgaacgggaaaccatgtgaaggcgaagcccgcgag accaaagcctgcacgaaagacgcctgccccatcaacggaggctggggtccctggtcactg tgggacctctgttctgtcacctgcggaggaggggtgcagaaacgtagccggctctgcaac aaccccacaccccagtttggaggcaaggactgtgtcggtgacacgacagaaagacagacc tgcaacaagcaggactgtccgattgacggatgcctgtccaatccctgctttgccggggtc aagtgtacgagttacgcagatggcagctggaaatgcggtgcctgtcccccgggctacagc ggaaacggcgtccagtgcgaagatgtggatgagtgcaaagaagtacccgacgcctgcttc aaccacaacggcgagcacaggtgtgagaacaccgaccccggctacaactgccttccctgc ccgcctcgcttcacgggcccgcagcccttcggccggggtgtggactacgccaccgccaac aaacaggtgtgcaagccgcgcaacccctgcacggacgggacgcacgactgcaacaagaac gccaagtgcagctacctgggccactacagcgaccccatgtaccgctgcgagtgcaagccc ggctacgcgggcaacggcatcatctgcggggaggacacggacctggacggatggcccaac gaggacctggtgtgcgtggccaatgccacctaccactgcaaaaaggataactgccccaat ctgcccaactccgggcaggaggactacgacaaggatggaatcggcgacgcctgtgatgac gacgatgacaatgataaaatcccagacgacagggacaactgcccattccattacaaccca gcccagtatgactacgaccgagatgatgtgggagaccgctgtgacaactgcccctacaac cacaaccccgatcaggctgacacggacaacaacggggaaggagacgcctgcgccgcagac atcgatggggacggtatcctcaatgaacgagacaactgccaatatgtctacaatgtggac cagagggacacagatatggatggggttggagatcagtgtgacaactgccccctggaacac aatccagatcagctcgattctgactcagaccgcattggagacacgtgtgacaacaatcag gatattgatgaagacggccaccagaacaacctggacaactgtccctatgtgcccaatgct aaccaggctgaccatgacaaagatggcaagggagatgcctgtgaccatgatgatgacaat gatggcattcctgatgacagggacaactgccgactcgtgcccaaccctgaccagaaggat tctgatggtgatggtcgaggtgatgcttgcaaagacgattttgaccatgacaatgtgcca gacattgatgacatctgtcctgaaaacattgatatcagcgagactgatttccgccgattc cagatgattcctctagatcccaaagggacatcccagaacgaccctaactgggtcgtacgc catcagggtaaagaactcgtccagaccgtcaactgtgaccctggacttgctgtaggttac gatgagtttaatgccgtggacttcagtggcaccttcttcatcaacacggaaagggatgac gactatgctggatttgtgttcggctaccagtctagcagccgcttttatgtcgtgatgtgg aagcaagtcacccagtcctactgggacaccaaccccactagggctcagggatactcaggc ctttctgtgaaagttgtgaactctaccaccgggccaggcgagcacctgcggaatgccctg tggcacacgggaaacacccctggccaggttcgtactttgtggcatgaccctcgtcacata ggctggaaagatttcactgcctacagatggcgtctcagccaccggcccaagacgggtttc attagagtggtgatgtacgaagggaagaaaatcatggctgactcaggacccatctatgac aaaacctatgctggtggcaggctagggttgtttgtcttctcgcaagaaatggtgttcttc tccgacctgaaatacgaatgcagagattcctaa

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