KEGG   Ailuropoda melanoleuca (giant panda): 100469252
Entry
100469252         CDS       T01329                                 
Symbol
SQSTM1
Name
(RefSeq) sequestosome-1
  KO
K14381  sequestosome 1
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
aml04137  Mitophagy - animal
aml04140  Autophagy - animal
aml04217  Necroptosis
aml04218  Cellular senescence
aml04380  Osteoclast differentiation
aml05014  Amyotrophic lateral sclerosis
aml05022  Pathways of neurodegeneration - multiple diseases
aml05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:aml00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    100469252 (SQSTM1)
   04137 Mitophagy - animal
    100469252 (SQSTM1)
  09143 Cell growth and death
   04217 Necroptosis
    100469252 (SQSTM1)
   04218 Cellular senescence
    100469252 (SQSTM1)
 09150 Organismal Systems
  09158 Development and regeneration
   04380 Osteoclast differentiation
    100469252 (SQSTM1)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    100469252 (SQSTM1)
   05022 Pathways of neurodegeneration - multiple diseases
    100469252 (SQSTM1)
  09166 Cardiovascular disease
   05418 Fluid shear stress and atherosclerosis
    100469252 (SQSTM1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:aml04131]
    100469252 (SQSTM1)
   03029 Mitochondrial biogenesis [BR:aml03029]
    100469252 (SQSTM1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:aml04147]
    100469252 (SQSTM1)
Membrane trafficking [BR:aml04131]
 Autophagy
  Mitophagy
   Cargo receptors
    100469252 (SQSTM1)
  Pexophagy
    100469252 (SQSTM1)
  Aggrephagy
    100469252 (SQSTM1)
  Xenophagy
    100469252 (SQSTM1)
  ER-phagy
   ER-phagy recepters
    100469252 (SQSTM1)
  Other autophagy associated proteins
   Midbophagy
    100469252 (SQSTM1)
Mitochondrial biogenesis [BR:aml03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Parkin-dependent mechanism factors
    100469252 (SQSTM1)
Exosome [BR:aml04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   100469252 (SQSTM1)
SSDB
Motif
Pfam: UBA_5 ZZ
Other DBs
NCBI-GeneID: 100469252
NCBI-ProteinID: XP_011225664
Ensembl: ENSAMEG00000008746
LinkDB
Position
3:complement(3749648..3758909)
AA seq 353 aa
MAMSYVKDDIFRIYIKEKKECRRDHRPPCAQEAPRGLVHPNVICDGCNGPVVGTRYKCSV
CPDYDLCAACEGKGLHREHSKLVFPAAFGPFSEGFSHSRWLRKLKHGHFGWPGWEMGPPG
NWSPRPPRAGDARPGPAAESAAGPSEDPSVNFLKNVGESVAAALSPLGIEVDIDVEHGGK
RSRLTPVSPGSSSTEEKCGSQPSSCSSDPSKPDGDPEGTAQSLAEQMNKVALESGPPEEQ
MESDNCSGGDEDWTHLSSKEVDPSTGELQSLQMPESEGPGSLDSSQEGPTGLKEAALYPH
LPPEADPRLIESLSQMLSMGFSDEGGWLTRLLQTKNYDIGAALDTIQYSKHPL
NT seq 1062 nt   +upstreamnt  +downstreamnt
atggcaatgtcctacgtgaaggatgacatcttccggatttacatcaaagagaagaaggag
tgtcggcgggaccaccgccccccgtgtgcccaggaggcaccccgcggcctggtgcacccc
aacgtgatctgtgacggttgcaatgggccagtggtagggacccgctacaagtgcagcgtg
tgcccggactacgacctgtgcgctgcctgcgaggggaagggcctgcaccgggagcacagc
aagcttgtcttcccagccgccttcgggcccttttctgagggcttctctcacagccgctgg
ctccggaagctgaaacacgggcacttcgggtggcccggctgggagatgggcccgccgggg
aactggagcccgcgtcctccccgagcaggggacgcccgccctggccctgcagcagaatca
gctgctggcccgtcggaggatcccagtgtgaatttcctcaagaacgtaggggagagtgtg
gcggctgccctgagccctctgggcattgaagtggatattgatgtggaacacggagggaag
agaagccgcctcacccccgtctctcctggcagctccagcaccgaggagaagtgtggctct
cagcccagcagctgctcttcggaccccagcaaaccagacggggacccggagggcacggcg
cagtctctcgcggagcagatgaacaaggtcgccctggagtcagggccgcctgaggaacag
atggagtctgataactgctcgggaggagacgaagactggactcacctgtcttcaaaagaa
gtggacccatctacaggagagctccagtctctgcagatgcccgaatccgaggggccgggc
tctctcgactcttctcaggaagggcccacaggcctgaaggaagctgcgttgtacccacat
ctgccaccagaagctgacccccggctcatcgagtcactctcccagatgctgtccatgggc
ttctcggacgagggcggatggctcaccaggctcctgcagaccaagaactacgacattggg
gccgcgctggacaccatccagtattccaagcacccgttgtga

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