Ailuropoda melanoleuca (giant panda): 100469601
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Entry
100469601 CDS
T01329
Symbol
KDM2A
Name
(RefSeq) lysine-specific demethylase 2A
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
100469601 (KDM2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aml03000
]
100469601 (KDM2A)
04121 Ubiquitin system [BR:
aml04121
]
100469601 (KDM2A)
03036 Chromosome and associated proteins [BR:
aml03036
]
100469601 (KDM2A)
Enzymes [BR:
aml01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
100469601 (KDM2A)
Transcription factors [BR:
aml03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
100469601 (KDM2A)
Ubiquitin system [BR:
aml04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
100469601 (KDM2A)
Chromosome and associated proteins [BR:
aml03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
100469601 (KDM2A)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
100469601 (KDM2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
JHD
F-box
JmjC
Cupin_8
LRR_4
Cupin_1
Motif
Other DBs
NCBI-GeneID:
100469601
NCBI-ProteinID:
XP_011225839
Ensembl:
ENSAMEG00000000531
UniProt:
G1L165
LinkDB
All DBs
Position
16:85632926..85742298
Genome browser
AA seq
1162 aa
AA seq
DB search
MEPEEERIRYSQRLRGTMRRRYEDDGISDDEIEGKRTFDLEEKLHTNKYNANFVTFMEGK
DFNVEYIQRGGLRDPLIFKNSDGLGIKMPDPDFTVNDVKMCVGSRRMVDVMDVNTQKGIE
MTMAQWTRYYETPEEEREKLYNVISLEFSHTRLENMVQRPSTVDFIDWVDNMWPRHLKES
QTESTNAILEMQYPKVQKYCLMSVRGCYTDFHVDFGGTSVWYHIHQGGKVFWLIPPTAHN
LELYENWLLSGKQGDIFLGDRVSDCQRIELKQGYTFVIPSGWIHAVYTPTDTLVFGGNFL
HSFNIPMQLKIYNIEDRTRVPNKFRYPFYYEMCWYVLERYVYCITNRSHLTKEFQKESLS
MDLELNGLESGNGDEEAVDREPRRLSNRRSVLTSPVANGVNLDYDGLGKTCRSLPSLKKT
LSADSSSDSSRGSHNGQVWDPQCSPRKDRKVHLTHFELEGLRCLVDKLESLPLHKKCVPT
GIEDEDALIADVKILLEELANSDPKLALTGVPIVQWPKRDKLKFPTRPKVRVPTIPITKP
HTMKPAPRLTPVRPAAASPIVSGARRRRVRCRKCKACVQGECGVCHYCRDMKKFGGPGRM
KQSCVLRQCLAPRLPHSVTCSLCGEVDQNEETQDFEKKLMECCICNEIVHPGCLQMDGEG
LLNEELPNCWECPKCYQEDNSEKAQKRKMEESDEEAVQAKVLRPLRSCDEPLTPPPHSPT
SMLQLIHDPVSPRGMVTRSSPGAGPSDHHSASRDERFKRRQLLRLQATERTMVREKENNP
SGKKELSEVEKAKIRGSYLTVTLQRPTKELHGTSIVPKLQAITASSANLRHSPRVLVQHC
PARTPQRGDEEGLGGEEEEEEEEEEEDDSAEEGGAARLNGRGSWAQDGDESWMQREVWMS
VFRYLSRRELCECMRVCKTWYKWCCDKRLWTKIDLSRCKAIVPQALSGIIKRQPVSLDLS
WTNISKKQLTWLVNRLPGLKDLLLAGCSWSAVSALSTSSCPLLRTLDLRWAVGIKDPQIR
DLLTPPADKPGQDNRSKLRNMTDFRLAGLDITDATLRLIIRHMPLLSRLDLSHCSHLTDQ
SSNLLTAVGSSTRYSLTELNMAGCNKLTDQTLIYLRRIANVTLIDLRGCKQITRKACEHF
ISDLSINSLYCLSDEKLIQKIS
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atggaacccgaagaagaaaggattcgttacagccagagattgcgaggtaccatgcgacga
cgctatgaagatgatggcatttcagatgatgaaattgaagggaaaagaacttttgacttg
gaagaaaaactccacaccaacaaatataatgcaaattttgttacttttatggaggggaaa
gattttaatgtagagtatatccagcggggtggcttgagagaccctctgattttcaagaat
tctgatggacttggaataaaaatgccagatccagacttcactgtgaatgatgtcaaaatg
tgtgtggggagtcgtcgcatggtggatgtcatggatgtgaacacacagaaaggcattgaa
atgaccatggctcagtggacacgctactatgagaccccagaggaagagcgagaaaaactc
tataatgtcatcagtctagagttcagccacaccaggctggagaacatggtgcagaggccc
tccacggtggatttcattgactgggtggacaacatgtggccaaggcatttgaaggaaagt
cagactgaatcaacaaatgccatcttggagatgcagtaccccaaagtacagaagtactgt
ctaatgagtgttcgaggctgctatactgacttccatgtggactttggtggtacctctgtt
tggtatcacatccatcaagggggaaaggtcttctggctcatcccccctacagcccacaac
ctggagctgtacgagaattggctgctgtcagggaaacagggagacatctttctgggtgac
cgggtgtcagattgccagcgcattgagctcaagcagggctataccttcgtcattccctca
ggctggattcatgctgtgtatactcctacagacacattagtctttggaggcaattttttg
catagcttcaatatccccatgcagttaaaaatatacaacattgaagatcggacacgggtt
ccaaataagttccgttatccattctactatgagatgtgttggtacgtgttggagcgctat
gtgtactgcataacaaaccgctcccacctaactaaggaatttcagaaagagtccctcagt
atggacttggaattaaatgggttggaatctggaaatggggatgaagaagcagtggatcga
gaaccgaggcgcctgagcaataggcgttctgtcctcactagccctgtagccaatggggtc
aacctggattatgacggactgggcaaaacctgccgaagtcttccaagtctgaagaaaacc
ttgtcagcggactcatcctctgactctagccggggctcccacaatggccaagtgtgggat
ccccagtgcagtccccgaaaggacaggaaggtgcatctgacccattttgagcttgagggc
ctccgctgtcttgtagataagttggagtctctgccactgcacaagaaatgtgtccccaca
gggatagaagatgaagatgctcttattgctgatgtgaagattttgctggaggagcttgcc
aacagcgatcccaagttagccctcactggagtccctatagtacagtggccaaaaagggat
aagcttaaattccccacccggccaaaggtgcgggttcctaccatccccatcacaaagcct
cacactatgaaaccggctcctcggttaacacctgtgaggccagctgccgcctcccccata
gtgtcaggagccaggcggagacgagtgcgctgtcggaaatgcaaagcctgtgtgcaagga
gagtgtggtgtatgccactattgcagggacatgaagaagtttggggggcctggtcgcatg
aagcagtcctgtgtccttcggcagtgcttggcacccagactgcctcactcagtcacgtgt
tccctctgtggagaggtggatcaaaatgaggagacacaggactttgagaagaaactcatg
gaatgctgtatctgcaatgagattgttcatcctggctgcctccagatggatggagagggg
ctgcttaatgaggaattgccaaattgctgggagtgtccaaagtgctaccaggaggacaac
tcagagaaagcccagaagcggaaaatggaagagagtgatgaagaagccgtgcaagccaaa
gtcctgcggcccctgcggagctgcgacgagcccctcacgcccccgcctcactcacccact
tccatgctgcagctcatccatgacccggtctccccccggggtatggtgactcggtcatcc
cctggggctggccccagcgaccaccacagtgccagccgcgatgagcgcttcaaacggcgg
cagttgctgcggctgcaggccacagagcgcaccatggtacgggaaaaggagaacaatccc
agcggcaaaaaggagctgtctgaagttgagaaagccaagatccggggatcgtacctcact
gtcacgctgcagaggcccaccaaagagctccacgggacatccattgtgcccaagctgcag
gccatcacggcctcctctgccaaccttcgccattccccccgtgtgctagtgcagcactgc
ccagcccgaaccccccagcgtggggatgaggaggggctggggggagaggaggaggaagag
gaggaggaggaggaggaagatgacagtgcagaggaggggggtgcagccaggctgaatggc
cggggcagttgggctcaggatggagacgaaagctggatgcagcgggaggtctggatgtct
gtcttccgctacctcagccgcagagaactttgtgaatgtatgcgagtgtgcaagacgtgg
tataaatggtgctgcgacaagagactttggacaaaaattgacttgagtaggtgtaaggct
attgtaccccaggctctcagtggcatcatcaagaggcagccagtcagccttgacctcagt
tggaccaacatctccaagaaacaactgacgtggcttgtgaacaggctgccaggactgaaa
gacctcctcctagcaggctgttcctggtctgcagtgtctgccctcagcacctccagctgc
ccccttctcaggacccttgatcttcggtgggcagtaggaatcaaggaccctcaaattcgg
gacttgctgactccaccggctgataaaccaggtcaggacaatcgcagcaagctccggaat
atgactgacttccggctggcaggccttgacatcacggacgccacgcttcgcctcatcatt
cgccacatgcccctcctctctcgactcgacctcagtcactgcagtcacctgacagatcag
tcctccaatctgctcaccgctgtcgggtcttccactcgctactccctcacagagctcaac
atggcaggttgcaataaactgacagaccagaccctgatctacctacggcgcatcgccaac
gtcaccttgatcgaccttcgaggatgcaagcagatcactcgaaaagcctgcgagcacttc
atctcagacttgtccatcaacagtctctactgcctgtctgacgagaagctgatacagaag
atcagctaa
DBGET
integrated database retrieval system