Ailuropoda melanoleuca (giant panda): 100473450
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Entry
100473450 CDS
T01329
Symbol
LDLR
Name
(RefSeq) low-density lipoprotein receptor isoform X2
KO
K12473
low-density lipoprotein receptor
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml03272
Virion - Hepatitis viruses
aml04144
Endocytosis
aml04913
Ovarian steroidogenesis
aml04925
Aldosterone synthesis and secretion
aml04927
Cortisol synthesis and secretion
aml04934
Cushing syndrome
aml04976
Bile secretion
aml04979
Cholesterol metabolism
aml05145
Toxoplasmosis
aml05160
Hepatitis C
aml05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
100473450 (LDLR)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
100473450 (LDLR)
09150 Organismal Systems
09152 Endocrine system
04913 Ovarian steroidogenesis
100473450 (LDLR)
04925 Aldosterone synthesis and secretion
100473450 (LDLR)
04927 Cortisol synthesis and secretion
100473450 (LDLR)
09154 Digestive system
04976 Bile secretion
100473450 (LDLR)
04979 Cholesterol metabolism
100473450 (LDLR)
09160 Human Diseases
09172 Infectious disease: viral
05160 Hepatitis C
100473450 (LDLR)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
100473450 (LDLR)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
100473450 (LDLR)
09167 Endocrine and metabolic disease
04934 Cushing syndrome
100473450 (LDLR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aml04131
]
100473450 (LDLR)
Membrane trafficking [BR:
aml04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
100473450 (LDLR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
EGF_LRP2
EGF
Vgb_lyase
EGF_3
Psg1
hEGF
Motif
Other DBs
NCBI-GeneID:
100473450
NCBI-ProteinID:
XP_002921438
Ensembl:
ENSAMEG00000010827
UniProt:
G1LWG2
LinkDB
All DBs
Position
4:8029755..8065116
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AA seq
857 aa
AA seq
DB search
MRPAGWGLCWAIALLLAATGAAVEDTCGRNEFQCQDGKCISYKWVCDGSAECLDASDESQ
ETCMSVTCKSGDFSCGGRVNRCIPQPWRCDGQVDCENGSDEQGCLPRTCAQNEFRCQDGK
CIALDFVCDSDRDCLDGSDEASCPMPTCGPASFQCNNSACIPDLWACDGDPDCKDGSDEW
PQRCGGRNTSAPQRDNGPCSSLEFYCRSGECIHSSWRCDGGPDCKDKSDEENCTVATCRP
DEFQCSDGTCIHGSRQCNRENDCKDMSDELGCINVTLCEGPNKFKCHSGECITLDKVCNS
IRDCRDWSDEPLKECGTNECLDNKGGCSHICNDLKMGYECLCPKGFRLVDQRRCEDIDEC
QDPDVCSQLCVNLEGSYKCDCEEGFQLDPHTKACKAVGNIAYLFFTNRHEVRKMTLDRSE
YTSLIPNLKNVVALDMEVARNRIYWSDLSQRKIYSTHIDRATSFSSYDTVISEDLQAPDG
LAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFKEKGSKPRAIVVDPVHGFMYWTDWGT
PAKIKKGGLNGVDVYSLVTEDIQWPNGITLDLSGGRLYWVDSKLHSISSIDVNGGNRKIV
LEDKKKLAHPFSLAIFEDKIFWTDIINEAIFSANRLTGSDINLVAENLLSPEDIVLFHNL
TQPRGVNWCERTALRNGGCQYLCLPAPQINPHSPKFTCACPDGMLLAKDMRSCLIGAEPG
TTTRGTSTVTVRPTVRSTAVEPKHTASPWSVASPEFTTAETVTMSQHALGDAASRGDEEK
PRSVGALYIILPIVLLILLCFGTFLLWKNWRLKSVNSINFDNPVYQKTTEDEVHICYSQD
GYTYPSRQMVSLEDDVA
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgagacccgcgggctgggggctgtgctgggccatcgccctgctcctcgcagcgactggg
gcggcagtggaagacacgtgtgggagaaacgagttccagtgccaagatgggaagtgcatc
tcctacaagtgggtttgtgacgggagcgccgagtgcctggatgcctccgatgagtcccag
gagacctgcatgtctgtcacctgcaagtctggggacttcagctgtggcggccgtgtcaac
cgctgcatccctcagccctggcgatgtgacggccaggtggactgcgagaacggctccgac
gagcaaggctgtctgcccagaacgtgcgcccagaatgagttccgctgccaggatgggaag
tgcatcgccctggatttcgtctgtgattcggatcgggactgtttggacgggtccgacgag
gcgtcctgccccatgcccacctgcggccctgccagcttccagtgcaacaactctgcctgc
atccccgatctgtgggcttgtgacggcgaccccgactgcaaggatggctcagatgagtgg
ccgcagcgctgtgggggccgcaacacgtcagccccccaacgggacaatggcccttgctcg
tccctcgaattctactgccggagcggcgaatgcatccactccagctggcgctgtgacggc
ggccctgactgcaaggacaagtccgatgaggagaactgcactgtggccacgtgccggcct
gatgagttccagtgctcggacgggacctgtatccacggcagccggcagtgcaacagggag
aatgactgtaaggacatgagcgacgagctcggctgcatcaacgtgacgctgtgtgagggc
cccaacaagttcaagtgccacagcggcgaatgcatcacactggacaaagtgtgcaactcg
atcagggactgtcgggactggtcggacgagcccctcaaggagtgcgggaccaacgagtgt
ctggacaacaagggcggctgctcccacatctgcaacgacctcaagatgggctatgagtgt
ttgtgccctaagggcttccggctggtggaccagcgaagatgcgaagatattgacgagtgt
caggatcccgacgtgtgcagccagctgtgcgtgaatctcgagggcagctacaagtgcgac
tgtgaggagggcttccagctggacccccacaccaaggcctgcaaggctgtgggcaacatc
gcctacctctttttcaccaaccgccacgaggtgcggaagatgaccctggaccgcagtgaa
tacaccagcctcatcccgaacctgaagaacgtcgtggccctagacatggaggtggcccgc
aacagaatctactggtctgacctgtcccagaggaagatctacagtacccatatcgacaga
gccaccagcttctcctcctatgacactgtcatcagcgaggacctccaggcccccgacggg
ctggcagtggactggatccacagcaacatatactggacagactccgtcctgggcactgtc
tccgtggcggacaccaagggtgtgaagagaaagacgctcttcaaggagaaaggctccaag
ccgcgtgccatcgtggtggaccccgtgcatggcttcatgtactggacagattggggaacc
cctgccaagatcaagaaggggggtctgaatggtgttgacgtttactcgcttgtcacggaa
gacatccagtggcccaatggcatcaccctggatctttctggtggccgcctctactgggtt
gactccaagctccactccatctccagcattgacgtcaacggcgggaaccggaagatcgtt
ttggaggacaagaaaaagctggcgcaccccttctccttggccatcttcgaggataaaata
ttttggacagacatcatcaacgaagccattttcagtgccaaccgtctcacaggctcagac
attaatttggtggcagaaaacctgttgtctccagaggacattgtcctttttcacaacctc
acacagccaagaggggtgaactggtgtgagaggaccgccctccgcaatggtggctgccag
tacctgtgtctcccagccccgcagatcaacccccactcgcccaagttcacctgtgcctgc
cctgatggcatgctgctggccaaggacatgaggagctgcctcataggggcggaacctgga
acgaccacccggggtacctccacggtcacagtcaggccgacagtccgctccacggccgtg
gagccaaagcacacagccagcccgtggtccgtggccagccctgagttcaccacggcagag
acggtgacgatgtcccaacacgccctgggagatgccgccagcagaggagatgaggagaag
ccaaggagcgtgggggctctgtacatcatcctccccattgtcctgctcatcctgctgtgt
ttcgggaccttcctcctctggaagaactggcggctcaagagcgtcaacagcatcaacttt
gacaaccccgtgtaccagaagaccacggaggatgaggtccacatctgctacagccaggac
ggctacacctacccttcgagacagatggtcagcctggaggatgatgtggcgtga
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