KEGG   Ailuropoda melanoleuca (giant panda): 100473588
Entry
100473588         CDS       T01329                                 
Symbol
GGPS1
Name
(RefSeq) geranylgeranyl pyrophosphate synthase isoform X2
  KO
K00804  geranylgeranyl diphosphate synthase, type III [EC:2.5.1.1 2.5.1.10 2.5.1.29]
Organism
aml  Ailuropoda melanoleuca (giant panda)
Pathway
aml00900  Terpenoid backbone biosynthesis
aml01100  Metabolic pathways
Module
aml_M00367  C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:aml00001]
 09100 Metabolism
  09109 Metabolism of terpenoids and polyketides
   00900 Terpenoid backbone biosynthesis
    100473588 (GGPS1)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01006 Prenyltransferases [BR:aml01006]
    100473588 (GGPS1)
Enzymes [BR:aml01000]
 2. Transferases
  2.5  Transferring alkyl or aryl groups, other than methyl groups
   2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
    2.5.1.1  dimethylallyltranstransferase
     100473588 (GGPS1)
    2.5.1.10  (2E,6E)-farnesyl diphosphate synthase
     100473588 (GGPS1)
    2.5.1.29  geranylgeranyl diphosphate synthase
     100473588 (GGPS1)
Prenyltransferases [BR:aml01006]
 Terpene biosynthesis
  Prenyl diphosphate synthase
   100473588 (GGPS1)
SSDB
Motif
Pfam: polyprenyl_synt EBA-175_VI
Other DBs
NCBI-GeneID: 100473588
NCBI-ProteinID: XP_002931038
Ensembl: ENSAMEG00000001137
UniProt: G1L2S4
LinkDB
Position
6:complement(57289056..57300825)
AA seq 300 aa
MEKTQETVQRILLEPYKYLLQLPGKQVRTKLSQAFNHWLKVPEDKLQIIIEVTEMLHNAS
LLIDDIEDNSKLRRGFPVAHSIYGIPSVINSANYVYFLGLEKVLTLDHPDAVKLFTHQLL
ELHQGQGLDIYWRDNYTCPTEEEYKAMVLQKTGGLFGLAVGLMQLFSDYKEDLKPLLNTL
GLFFQIRDDYANLHSKEYSENKSFCEDLTEGKFSFPTIHAIWSRPESTQVQNILRQRTEN
VDIKKYCVHYLENVGSFEYTRSTLKELESKAYKQIDARGGNPELVALIKHLSKMFKEENE
NT seq 903 nt   +upstreamnt  +downstreamnt
atggagaagactcaagaaacagtccagagaattcttctagaaccctataagtatttactt
cagttaccaggtaaacaagtgagaaccaaactttcacaggcatttaatcattggctaaaa
gttccagaagacaagctacagattatcattgaagtgacagaaatgttgcataatgccagt
ttgctcattgacgatatcgaagacaactcaaaactccgacgtggctttccagtggcacac
agcatctatggaattccatctgtcatcaattctgccaattatgtatattttcttggccta
gagaaagtcttaacccttgatcacccagatgcagtgaagctttttacccaccagcttttg
gaactccatcagggacaaggtctagatatttattggagggataattacacttgtcctact
gaagaagaatataaagcgatggtgctgcaaaagacaggtggactatttgggttagcagta
ggtctcatgcagttgttctctgattacaaagaagatctaaagccactacttaatacactt
gggctcttcttccaaattagggatgattatgctaatctacactccaaagaatatagtgaa
aacaaaagcttttgtgaagatctaacagagggaaagttctcattccctaccattcacgct
atttggtcgaggcctgaaagcacccaggtgcagaatatcttgcgccagagaaccgaaaat
gtagatattaaaaaatattgtgtacattatcttgagaatgtaggttcttttgaatacact
cggagtactcttaaagagcttgaatctaaagcctataaacaaattgatgcacgtggtggg
aaccctgagctcgtagctctaataaagcacttaagcaaaatgttcaaagaagaaaatgaa
taa

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