Ailuropoda melanoleuca (giant panda): 100475872
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Entry
100475872 CDS
T01329
Symbol
TRAF5
Name
(RefSeq) TNF receptor-associated factor 5 isoform X2
KO
K09849
TNF receptor-associated factor 5
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04064
NF-kappa B signaling pathway
aml04217
Necroptosis
aml04621
NOD-like receptor signaling pathway
aml04657
IL-17 signaling pathway
aml04668
TNF signaling pathway
aml05163
Human cytomegalovirus infection
aml05168
Herpes simplex virus 1 infection
aml05169
Epstein-Barr virus infection
aml05170
Human immunodeficiency virus 1 infection
aml05200
Pathways in cancer
aml05203
Viral carcinogenesis
aml05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
100475872 (TRAF5)
04668 TNF signaling pathway
100475872 (TRAF5)
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
100475872 (TRAF5)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
100475872 (TRAF5)
04657 IL-17 signaling pathway
100475872 (TRAF5)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100475872 (TRAF5)
05203 Viral carcinogenesis
100475872 (TRAF5)
09162 Cancer: specific types
05222 Small cell lung cancer
100475872 (TRAF5)
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
100475872 (TRAF5)
05168 Herpes simplex virus 1 infection
100475872 (TRAF5)
05163 Human cytomegalovirus infection
100475872 (TRAF5)
05169 Epstein-Barr virus infection
100475872 (TRAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
aml04121
]
100475872 (TRAF5)
Ubiquitin system [BR:
aml04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRAF proteins
100475872 (TRAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAF-mep_MATH
MATH_2
zf-TRAF
TRAF3_RING
zf-C3HC4_2
zf-C3HC4
zf-TRAF_2
RING_XB3-XBAT31
DUF4941
zf-C3HC4_4
zf-RING_UBOX
zf-RING_2
Sina_ZnF
zf-RING_6
DUF5753
BLOC1_2
Mt_ATP_synt
Spc29
DUF5917
Motif
Other DBs
NCBI-GeneID:
100475872
NCBI-ProteinID:
XP_011220562
Ensembl:
ENSAMEG00000001120
UniProt:
D2H652
LinkDB
All DBs
Position
8:complement(93208508..93253458)
Genome browser
AA seq
558 aa
AA seq
DB search
MAYSEEQGGVPCGFIRQNSGNSISLDFEPDTEYRFVDPLEERYKCAFCHSVLHNPHQTGC
GHRFCQHCILSLRELNAVPLCPVDKEVIRSQEVFKDNCCKREVLNLYVYCKNAPGCNAKI
ILGRFQDHLQQCLFQAVQCSNENCQELVLRKDLKEHLSARCHFREEKCLYCKKDVVVINL
QNHEENLCPEYPVSCPNKCLQIIPRTEVDEHLAVCPEGEQDCPFKHYGCAVKDKRGNLQE
HEHSALRDHMLLVLEKNFQLEEQISDLYKSLEQKESKIQQLAETVKKFEKEFKQFAQLFG
KNGSFLSNIQVLASHIDKSAWLEAQVRQLLQMANQQQSKFDLRPLVEAIDTVKQKITLLE
TNDQRLVVLEGETNKHDAHINIHKAQLNKNEERFKLLEGACYNGKLIWKVTDYKMKKREA
LDGHTLSIFSQPFYTSRCGYRLCARAYLNGDGSGKGTHLSLYFVVMRGEFDSLLQWPFRQ
RVTLMLLDQSGKKNHIMETFKADPSSSSFKRPDGEMNIASGCPRFVAHSTLENAKNTYIK
DDTVFLKVAVDLTDLEDL
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggcttattctgaggagcaaggaggtgtcccgtgtggtttcatccgccagaattccggc
aactccatctccttggactttgagcccgacacagagtaccggtttgtggacccattagaa
gagcgctacaagtgtgctttctgccactccgtgctgcacaacccccaccagacgggctgc
gggcaccgcttctgccagcactgcatcctgtccctgagagaattaaatgcagtcccactc
tgtcctgtagataaggaggttatcagatctcaggaggtgttcaaagacaattgctgcaaa
agggaagtcctcaatttatatgtgtattgcaaaaatgctcctggatgtaacgccaagatt
attctgggacgattccaggaccacctccaacagtgcctgtttcaagctgtgcagtgttct
aatgagaactgtcaggagctagtccttcggaaagatctgaaagaacatttgagtgcacgt
tgccattttcgagaggaaaaatgcctttattgcaaaaaagatgtggtagtaatcaatcta
cagaatcatgaggaaaacttgtgtcccgagtacccagtatcttgtcctaacaagtgtttg
cagattattccaagaactgaggtggatgaacatcttgctgtgtgtcctgaaggtgaacaa
gactgtccttttaagcactatggctgtgctgtaaaggataaacgggggaacctgcaggag
catgagcattccgccttacgggaccacatgcttctggttttagaaaagaactttcagtta
gaagaacagatttctgatttatataagagcctagagcagaaagaaagtaaaatccagcag
ctagcagaaactgtaaagaaattcgaaaaggagttcaagcagtttgcacagctgtttggc
aaaaatggaagcttcctctcaaacatccaggttctcgccagtcacattgacaaatctgct
tggctagaagctcaagtgcgccagttgttacaaatggccaaccagcagcaaagtaaattt
gatctgaggcctttggtggaagcgattgatacagtgaaacagaaaattactctgctagaa
accaatgatcaaagactggttgttctggaaggggagactaacaaacacgatgcccacatt
aatatccataaagcccaactgaataaaaatgaagagcgatttaagctgctggaaggggcc
tgctataacggaaagctcatctggaaggtgacagactataagatgaagaagagggaggcg
ctggacgggcacacgctgtccatcttcagccagcctttctataccagccggtgtggctac
cggctctgtgctagagcgtacctgaacggggacgggtccgggaaggggacccacctgtcg
ctgtacttcgtggtgatgcgaggggagtttgactccctgttgcagtggccgttcaggcag
agggtgaccctgatgcttttggaccagagtggtaaaaagaaccacatcatggagaccttc
aaggctgaccccagcagcagcagctttaaaagacctgatggggagatgaacattgcgtct
ggctgcccccgtttcgtggcccactccactttggagaatgccaagaacacctacattaaa
gatgacaccgtgttcctgaaagtggctgtggatttaactgacctagaggacctctag
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