Ailuropoda melanoleuca (giant panda): 100477081
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Entry
100477081 CDS
T01329
Symbol
ARHGEF1
Name
(RefSeq) rho guanine nucleotide exchange factor 1 isoform X1
KO
K12330
Rho guanine nucleotide exchange factor 1
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04270
Vascular smooth muscle contraction
aml04611
Platelet activation
aml04810
Regulation of actin cytoskeleton
aml04928
Parathyroid hormone synthesis, secretion and action
aml05135
Yersinia infection
aml05163
Human cytomegalovirus infection
aml05200
Pathways in cancer
aml05205
Proteoglycans in cancer
aml05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
100477081 (ARHGEF1)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
100477081 (ARHGEF1)
09152 Endocrine system
04928 Parathyroid hormone synthesis, secretion and action
100477081 (ARHGEF1)
09153 Circulatory system
04270 Vascular smooth muscle contraction
100477081 (ARHGEF1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
100477081 (ARHGEF1)
05205 Proteoglycans in cancer
100477081 (ARHGEF1)
09172 Infectious disease: viral
05163 Human cytomegalovirus infection
100477081 (ARHGEF1)
09171 Infectious disease: bacterial
05135 Yersinia infection
100477081 (ARHGEF1)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
100477081 (ARHGEF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aml04131
]
100477081 (ARHGEF1)
Membrane trafficking [BR:
aml04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
100477081 (ARHGEF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PH_13
AbiJ_NTD3
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
100477081
NCBI-ProteinID:
XP_034495350
Ensembl:
ENSAMEG00000004495
LinkDB
All DBs
Position
12:complement(35117812..35136159)
Genome browser
AA seq
946 aa
AA seq
DB search
MPSTLLSASPVEPMEAEDVARGLAPGPPRPGLVPVSIIGAEDEDFENELETNAEEQNSQF
QSLEQVKRRPAHLMALLQHVALQFEPGPLLCCLHADMLASLGPKEAKKAFLDFYHSFLDK
TATIIPSGHLGCGPVTPTLPGPPLHSILCPEQVLRVQVPPTVAFELDRTRPDLLSEDVQR
QFVQEVVQSQQAAVSRLLEDFRSKRLMGMTPWEHDLTQLEAWVGRDRASFEARERHLAER
LLTHLEEMQHTISTDEEKSAAVVNAISLYMRHLGVRTKSGDKKSGRNFFRKKMMGNRRSD
EPTKSKKGLSIFLDAARWNRGEPQAPDFRHLKVEADAEKPGLTEKRGGLGVPSRDRNFGA
PGQDVPGVSLHPLSGDSPDREPGLDATPELGDPPPQGPASLEPLVPPESTEEGADTERRW
KRLSGRLGRSESLRVSDRRRPSRGSLGAKGRGGGRSRSDVDMDPSSATAVLGPARRATPE
PGDEGDPGRSGLELEPEEPPGWRELVPVGTLHSLPKSQVKRQEVISELLVTEAAHVRMLR
VLHDLFYQPMAEGGFFSQEELQNIFPSLDELIEVHSLFLDRLMKRRQDSGYLIEEIGDVL
LARFDGAEGKWFQKISSRFCSRQSFALEQLKVKQRKEPRFCAFVQEAESRPRCRRLQLKD
MIPTEMQRLTKYPLLLQSIGQNTEEPVERERVELAAECCREILHHVNQAVRDMEDLLRLK
DYQKRLDLSHLRQSSDPMLSEFKNLDITKKKLVHEGPLTWRVTKDKAVEVHVLLLDDLLL
LLQRQDERLLLKSHSRTLTPTPDGKTMLRPVLRLTSAMTREVATDHKAFYVIFTWDQEAQ
IYELVAQTVSERKNWCSLITDTAGSLKVPAPASRPKSRPSPSSTREPLLSSSENGNGGGR
EIPPGDGRMERILSALLPYCRPVPEGQLAAKALEKGRLAVPRRGCR
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgcctagcacactgttaagtgctagccctgtggagcccatggaggcagaggacgtcgcc
cgcgggctggccccaggaccaccgcggcctggcctggtgccagtcagcatcatcggggct
gaggatgaggattttgagaatgagctggagacgaacgcagaggagcaaaacagccagttc
cagagcctggagcaggtgaagcggcggcctgcccacctcatggcgctcctgcagcacgtt
gccctgcagtttgaaccgggacccctgctctgctgccttcacgcggatatgctggcttcc
ctgggccccaaggaggccaagaaggccttcctcgacttctaccatagctttctggacaag
accgcgaccatcattcccagcgggcacctgggctgcggtcctgtaaccccaacactgcct
ggtcctccccttcattccattctctgtccggagcaggttttgcgggtacaagtccctccc
actgtcgcctttgaacttgaccgcacgcggcccgacctcctctctgaggacgtccagcgg
cagttcgtgcaggaggtggtgcagagccagcaggccgccgtcagccggctgctggaggac
ttccgctccaagcggctcatgggcatgacgccctgggagcatgacctgacccagctggag
gcctgggttgggcgggaccgggccagctttgaggcgcgggagcggcacttggccgagcgg
ctgctgacccacctagaggagatgcaacacaccatctctaccgatgaggaaaagagtgcc
gctgtggtcaacgcgatcagcctgtacatgcgccaccttggggtgcggaccaagagcggg
gacaagaagtcggggaggaatttcttccgaaaaaagatgatgggcaatcgacggtcagat
gagccaaccaagagcaagaaaggcctgagcatcttcctggacgctgcccgctggaaccgg
ggagagcctcaggccccagatttccgacacctcaaagtcgaggctgatgctgagaagcca
ggccttacggaaaagaggggaggcctgggggtgccctcccgggaccggaactttggggct
cctgggcaggatgtccctggagtttctctgcaccctctatctggagatagccctgaccgg
gaaccaggtcttgatgccacaccagagctgggggacccgcccccacagggcccggccagc
ctggagcccctggtacccccggagagcaccgaggagggtgctgacacagagagaaggtgg
aagaggctatcggggcgtctggggcgctcggagagcctgcgggtgagtgaccgccgccgg
ccttcccggggcagcctcggggctaagggccggggtgggggccgctcccggagtgacgtg
gacatggaccccagctctgccacggccgtgcttggccctgcccgacgagccacccctgag
cctggagacgaaggggacccgggacggtcaggactagagctggaaccagaagagccccct
ggctggcgggagctcgtcccagttggcaccctgcacagcctgcctaagagccaggtgaag
cggcaggaggtcatcagcgagctgctggtgacagaggccgcccacgtgcgcatgctccgg
gtgctgcatgacctcttctaccagcccatggcagaagggggcttcttctcccaggaggag
ctacagaacatctttcccagcctggacgagctcatcgaggtgcattccctgttcctcgat
cggctgatgaagcggaggcaggatagtggctacctcattgaggagatcggagacgtactg
ctggcccggtttgatggtgccgaaggcaaatggttccagaaaatctcctcccgcttctgc
agccgccagtcgtttgccttagagcagctcaaagtcaagcagcgcaaggagcctcggttc
tgtgccttcgtgcaggaggcggagagccgcccgcggtgccgccgcctgcagctgaaggat
atgatccccacggagatgcagcggctgaccaagtaccccctgctcctgcagagcatcggg
cagaacacagaagagccggtggaacgggagagagtggaactggcagccgagtgctgccgg
gagattctgcaccatgtgaaccaagccgtgcgtgacatggaggacctgctgcggctcaag
gattatcagaagcgcctggacttgtcccacctgcggcagagcagcgaccccatgctgagc
gagttcaagaacctggacatcaccaagaagaagctggtgcacgagggcccgctgacgtgg
cgggtgacgaaggacaaggctgtagaggtccacgtgctgctgctggacgacctgctgctg
ctgctccagcgccaagacgagcggctgctgctcaagtcccacagccggacgctgacgccc
acgcccgatggcaagaccatgctgcggcccgtgctgcggctcacgtccgccatgacccgc
gaggtggctaccgatcacaaagccttctatgtcatttttacgtgggaccaagaagcccag
atatatgaactggtggcccagaccgtgtcggaacgaaaaaactggtgttccctcatcacc
gacactgctggatccttgaaggtccctgctcccgcctctcgccccaaatcccggcccagc
cctagcagcacacgagaacccctgctcagcagctcggagaatggcaacgggggtggccga
gagatacccccaggggacggccgaatggagagaatcctcagcgccctcctgccctactgc
aggcccgtccccgagggccagcttgctgccaaggcccttgagaaaggtaggctggcggtg
cccaggcgaggctgccgctag
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