KEGG   Ailuropoda melanoleuca (giant panda): 100477084
Entry
100477084         CDS       T01329                                 
Symbol
KDM6B
Name
(RefSeq) lysine-specific demethylase 6B
  KO
K11448  lysine-specific demethylase 6B [EC:1.14.11.68]
Organism
aml  Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:aml00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:aml03036]
    100477084 (KDM6B)
Enzymes [BR:aml01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.68  [histone H3]-trimethyl-L-lysine27 demethylase
     100477084 (KDM6B)
Chromosome and associated proteins [BR:aml03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    100477084 (KDM6B)
SSDB
Motif
Pfam: JmjC KDM6_C-hel TPR_2 TPR_1 TPR_14 TPR_7
Other DBs
NCBI-GeneID: 100477084
NCBI-ProteinID: XP_034503163
LinkDB
Position
17:2553385..2572905
AA seq 1056 aa
MHRAVDPPGARAAREAFALGGLSCAGAWSSCPPHPPPRSAWLPGGRCSASIGQPPLSAPL
PPSHGSSSGHPNKPYYAPGTPTPRPLHGKLESLHGCVQALLREPAQPGLWEQLGQLYESE
HDSEEAIRCYHSALRYGGSLAELGPRIGRLQQAQFWNFHAGSCQHRAKVLPPLEQVWNLL
HLEHKRNYGAKRGGPPVKRAAEPPVVQPVPPAALSGPSGDEGLSPGGKRRRGCSSEQTGL
PPGLPLPPPPLPPPPPPPPPPPPPPLPGLATSPPFQLTKPGLWSTLHGDVWGPERKGSAP
PERQEQRHPLPHPYPYPAPAYTAHPPGHRLVPATPPGPGPRPPGAESHGCPPATRPPGSD
LRESRVQRSRMDSSVSPAATTACVPYAPPRPPGLPGTTSSSSSSSSNTGLRGAEPSPGIP
GADHYQTPAPDVSSHQGRLGPSAHSNTAGPVDTAGPVDTAGPVDSGTERLLPPAQAREEG
GGAGAAAGPGSGKRRKEHQKEHRRHRRACKDSVGRRPREGRAKTKAKAPKEKSRRVLGNL
DLQSEEIQGREKARPDLGGASKAKPPTVPAPPPAPAPSAQPTPPSAPGPGKKAREEAPGP
PGVSRADMLKLRSLSEGPPKELKIRLIKVESGDKETFIASEVEERRLRMADLTISHCAAD
VVRASKNAKVKGKFRESYLSPAQSVKPKINTEEKLPREKLNPPTPSIYLESKRDAFSPVL
LQFCTDPRNPITVIRGLAGSLRLNLGLFSTKTLVEASGEHTVEVRTQVQQPSDENWDLTG
TRQIWPCESSRSHTTIAKYAQYQASSFQESLQEEKESEDEESEEPDSTTGTPPSSAPDPK
NHHIIKFGTNIDLSDAKRWKPQLQELLKLPAFMRVTSTGNMLSHVGHTILGMNTVQLYMK
VPGSRTPGHQENNNFCSVNINIGPGDCEWFAVHEHYWETISAFCDRHGVDYLTGSWWPIL
DDLYASNIPVYRFVQRPGDLVWINAGTVHWVQATGWCNNIAWNVGPLTAYQYQLALERYE
WNEVKNVKSIVPMIHVSWNVARTVKISDPDLFKMIK
NT seq 3171 nt   +upstreamnt  +downstreamnt
atgcatcgggcagtggaccctccaggggcccgcgctgcacgggaagcctttgcccttggg
ggcttgagctgtgctggggcctggagctcctgcccgccccatccccctcctcgtagcgca
tggctgcctggaggcaggtgctctgccagcatcgggcagcccccactctctgctccccta
cccccttcacatggcagtagctctgggcaccccaacaaaccgtattatgctccagggacc
cccaccccgagacccctccatgggaagctggaatccctgcatggctgtgtgcaggcattg
ctccgagagccggcccagccagggctgtgggagcagcttggacagctgtacgagtcagag
cacgacagtgaggaggccattcgctgctaccacagtgcccttcgatatggaggaagcttg
gctgagttggggccccgcatcgggcgactacagcaggcccagttctggaactttcatgct
ggctcctgccagcaccgagccaaggtcctgccccctctggagcaagtgtggaacttgctg
cacctggagcacaagcggaactacggggccaaacggggaggtcccccagtgaagcgagct
gccgaacccccagtggtgcagcctgtgcctcctgcagcgctctccggcccctcgggggac
gagggcctcagccctggaggcaagcgcaggagaggctgcagctcggagcagactggcctt
cccccagggctgccgctgcctccaccgccactgccgccaccgccgccaccaccaccacca
ccgccccccccacccctgcctggcttagccactagccctccatttcagctgaccaagcca
gggctgtggagtaccctgcatggagatgtctggggccccgagcgcaagggttcagcaccc
ccagagcgccaggagcagcggcacccgctgccccacccgtatccatacccggctccggcc
tacaccgcgcacccccctggccaccggctggtcccggccacacccccaggccccggcccc
cgccccccaggagcagagagccatggctgcccgcctgccacccgtccccccggaagtgac
cttagagagagcagagttcagaggtcgcggatggactccagcgtttcaccagcagcaacc
accgcctgcgtgccttacgcccctccccggccccctggcctccccggcaccaccagcagc
agcagtagcagcagcagcaacaccggtctccggggcgcggagccgagcccaggcatcccc
ggcgctgaccattaccaaactcccgcgccggacgtctcctctcaccaaggccgcctgggg
ccctcggcacacagcaacacggcgggcccggtggacacggcaggcccggtggacacggca
ggcccggtggacagtgggactgagcgactgctgcctcccgcccaggcccgggaggagggt
ggcggggcgggggcagcggcaggaccaggcagcggcaagcggcggaaggagcaccagaag
gagcaccggaggcacaggcgggcctgtaaggacagcgtgggtcggcggccccgagagggc
agggcaaagaccaaggccaaggcccccaaagaaaagagccgccgggtgctgggcaacctg
gacctgcagagcgaggagatccaggggcgcgagaaggcccggcccgatctcggcggggcc
tccaaggccaagccacccacggttccggcccctccgccagctcctgcgccctccgcccag
cccacgcccccctcagctcctggtcctgggaagaaggcccgggaggaagcgccagggcca
ccaggtgtcagccgggctgacatgttgaagctgcgctcacttagtgaagggccccccaag
gagctgaagatccgtctcatcaaggtagagagtggtgacaaggagacctttatcgcctct
gaggtggaggagcggaggctgcgcatggcggacctcaccatcagccactgcgccgctgac
gtcgtgcgtgccagcaagaacgccaaggtgaaagggaagtttcgagagtcctacctttcc
cccgcccagtctgtgaaaccgaagatcaacactgaggagaagctgccccgagaaaaactc
aacccacccacccccagcatctatctggagagcaaacgggacgccttctcgccggtgctg
ctgcagttctgtacagaccctcgaaatcccatcaccgtgatccggggcctggcgggctcc
ctgcggctcaacttgggcctcttctccaccaagacgctggtggaggcgagcggcgagcac
acggtggaggtgcgcacgcaggtgcagcagccctccgatgagaactgggatctgacgggt
acgcggcagatctggccctgcgagagctcccgttcccacaccaccattgccaagtacgcg
cagtaccaggcctcgtccttccaggagtccctgcaggaggagaaggagagcgaggatgag
gagtccgaggagcccgacagcaccacaggaacccctcccagcagcgcaccagacccgaag
aaccatcacatcatcaagtttggcaccaacatcgacctgtctgatgccaagaggtggaag
ccccagctgcaggagctgctgaagctgcccgccttcatgcgggtcacatccacgggcaac
atgctgagccacgtgggccacaccatcctgggcatgaacacggtgcagctgtacatgaag
gtcccaggcagccgaacgccaggccaccaggagaacaacaacttctgctccgtcaacatc
aacatcggcccgggcgactgcgagtggttcgcggtgcacgagcactactgggagaccatc
agcgccttctgcgaccggcacggcgtggactacctgactggttcctggtggccaatcctg
gatgacctctatgcttccaatatccctgtgtaccgcttcgtgcagcgccccggagacctc
gtgtggattaacgcgggcaccgtgcactgggtgcaggccaccggctggtgcaacaacatc
gcctggaacgtggggcccctcactgcttatcagtaccagctggccctggaacgatacgag
tggaacgaggtgaagaacgtcaaatccatcgtgcccatgattcacgtgtcctggaacgtg
gctcgcacagtcaaaatcagcgacccggacttgttcaagatgatcaagtga

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