Ailuropoda melanoleuca (giant panda): 100479400
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Entry
100479400 CDS
T01329
Symbol
OTOF
Name
(RefSeq) otoferlin isoform X1
KO
K19949
otoferlin
Organism
aml
Ailuropoda melanoleuca (giant panda)
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
aml04131
]
100479400 (OTOF)
Membrane trafficking [BR:
aml04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
100479400 (OTOF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
FerB
Ferlin_C
dsrm_Ferlin
FerI
Motif
Other DBs
NCBI-GeneID:
100479400
NCBI-ProteinID:
XP_034515670
Ensembl:
ENSAMEG00000002163
LinkDB
All DBs
Position
4:123913504..124008521
Genome browser
AA seq
2033 aa
AA seq
DB search
MDYMVLNWKPVPAPSRPSALCGQGSCDCIHSLILRHQEVAWYVADSRQAFYSRVLENCED
VADFDETFRWPVASSIDSNEILEIQIFNYSKVFSNKLIGTFRMVLQRVVEEKHVEVTDTL
MDDNNAVIKTVLCVEVRYQATDGTVGSWDDGDFLGDESFHEEEKDSQETDGLLPGSRPSC
RTPGEKSFRSKGREKTKGGRDGEHKAGRSVFSAMKLGKNRPHKEEPQRQDEPAVLEMEDL
DRLAIRLGDGLDPDSMSLASVTALTTNVSNKRSKPDIKMEPCAGRPMDFQVSVTVIEARQ
LVGLNMDPVVCVEVGDDKKYTSMKESTNCPYYNEYFVFDFHVSPDVMFDKIIKISVIHSK
NLLRSGTLVGSFKMDVGTVYSQPEHQFHHKWAMLSDPDDISAGLKGYVKCDVAVVGKGDN
IKTPHKANETEEDDIEGNLLLPEGVPPERQWARFYVKIYRAEGLPRMNTSLMANVKKAFI
GENKDLVDPYVQVFFAGQKGKTSVQKSSYEPLWNEQVVFTDLFPPLCKRVKVQIRDSDKV
NDVAIGTHFIDLRKISNDGDKGFLPTLGPAWVNMYGSTRNYTLLDEHQDLNEGLGEGVSF
RARLMLGLAVEILDTSNPELTSSTEVQVEPATPVSESCTGKMEEFFLFGAFLEASMIDRK
NGDKPITFEVTIGNYGNEVDGLSRPQRPRPRKEPGDEEEVDLIQNSSEDEADEGGDLASV
SSTPPMRPQITDRNYFHLPYLDRKPCIYIKSWWLDQRRRLYNANIMDHIADKLEEGLNDV
QEMIKTEKSYPERRLRGVLEELSCGCYRFLSLADKDQGHASRTRLDRERLKSCLRELESM
GQQAKTLRAQVKKHTVRDKLRLCQNFLQQLRFLADEPQHSVPDVFIWMLSNNKRVAYARV
PSKDLLFSAVEQELGKDCAKVKTLFLKLPGKRGFGSAGWTVQAKLELYLWLGLSKHRKDF
LCGLPCGFEEVKAAQGLGLHSFPPISLVYTKKQAFQLRAHMYQARSLFAADSSGLSDPFA
RVFFINQSQCTEVLNETLCPTWDQMLVFDNLELYGEAHELRDDPPIIVIEIYDQDTMGKT
DFMGRTFAKPLVKMADEAYCPPRFPPQLEYFQIYRGAATAGDLLAAFELLQIGPAGKADL
PPISGPVDMDRGPIMPVPVGIRPVLSKYRIEVLFWGLRDLKRVNLAQVDRPRVDIECAGK
GVQSSLIHNYKKNPNFSTLVKWFEVDLPENELLHPPLNIRVVDCRAFGRYTLVGSHAVSS
LRRFIYRPPDRSAPSRNTVVRLLRDGRVLCYRGPSSHPAGEVVVNMELEAPVKKLETVVK
LGATSDAVIKVDVADEEKEKNKKKKKKGSSEEPEEEPDESMLDWWSKYFASIDTMKEQLR
QQETSGTDLEEKEEVDNTEGLKGQMKGKEKAKAGKEEKKKRTQSPGTGQGSEAPEKKKPK
IDELKVYPKELESEFDNFEDWLHTFNLLRGKTGDDEDGCTEEERIVGRFKGSLCMYKVPL
PEDVSREAGYDPTYGMFQGIPSNDPINVLVRVYVVRATDLHPADINGKADPYIAIRLGKT
DIRDKENYISKQLNPVFGKSFDIEASFPMESMLTVAVYDWDLVGTDDLIGETKIDLENRF
YSKHRATCGIAQTYSLHGYNIWRDPMKPSQILTRLCKEGKVDGPHFGPPGRVKVSNHVFT
GPSEIEDENGQRKPTEEHVALCALRHWEDMPRVGCRLVPEHVETRPLLNPDKPGIEQGRL
ELWVDMFPMDMPAPGTPLDISPRKPKKYELRVIVWNTDEVVLEDDDFFTGEKSSDIFVRG
WLKGQQEDKQDTDVHYHSLTGEGNFNWRYLFPFDYLAAEEKIVISKKESMFSWDETEYKI
PARLTLQIWDADHFSADDFLGAIELDLNRFPRGAKTAKQCTMEMALGEVDVPLVSIFKQK
RVKGWWPLLARNENDEFELTGKVEAELHLLTAEEAEKNPVGLARNEPDPLEKPNRPDTAF
VWFLNPLKSIKYLVCTRYKWLIVKVVLALLGLLLLALFLYSLPGYTVKKLLGA
NT seq
6102 nt
NT seq
+upstream
nt +downstream
nt
atggattatatggtattgaactggaaacctgttccagctccctctagaccatcagctctc
tgcgggcaggggtcctgtgattgtatccattccttaatcctgaggcaccaggaggtggcc
tggtatgttgcagactccaggcaagccttctattcccgggtgctggagaactgtgaagat
gtggctgacttcgatgagaccttccggtggccagtggccagcagcatcgacagcaatgag
atactcgagattcagatcttcaactacagcaaagtcttcagcaacaagctcatcgggacc
ttccgcatggtgctgcagagggtggtggaggagaagcacgtggaggtgaccgacacactg
atggatgacaacaacgctgtcatcaagaccgtcctgtgcgtggaggtccggtatcaggcc
acagacggcacggtgggctcctgggatgatggagacttcctgggggacgagtcctttcat
gaggaagagaaggacagccaggagacagatgggctgctccctggctcccgccccagctgc
cggacaccaggcgagaagagcttccggagcaaaggcagagagaagaccaagggaggcaga
gatggcgagcacaaagccgggagaagtgtgttctcggccatgaagctcggcaagaatcgg
ccccacaaggaggaaccccaaagacaagatgaaccggctgtgctggagatggaggacctt
gaccgcttggccattcggctgggggatgggctggaccccgactccatgtctctagcctct
gtcacagctctcaccaccaacgtctccaacaagcgatccaagccagacattaagatggag
ccatgtgccgggcgccccatggatttccaggtcagcgtcactgtgattgaggcccggcag
ctggtgggcttgaacatggaccccgtggtgtgcgtggaggtgggtgacgacaagaagtat
acatccatgaaggagtccactaactgcccctactacaatgagtacttcgtcttcgacttc
cacgtctctcctgacgtcatgttcgacaaaatcatcaagatctcggtgattcactccaag
aacctgctgcgcagcggtaccctagtggggtccttcaagatggatgtgggaaccgtgtac
tcccagcccgagcaccagttccaccacaagtgggccatgctgtcagaccccgatgacatc
tctgctgggctgaagggctacgtgaagtgtgacgtcgccgtggtgggcaagggggacaac
atcaagacaccccacaaggccaacgagacagaggaggatgacattgaggggaacttgctg
ctgcctgagggggtaccccctgaacgccagtgggcccggttctacgtgaaaatttaccga
gcagaggggctgccccgcatgaacaccagcctcatggccaacgtgaagaaggctttcatc
ggtgagaacaaggacctggtcgacccctatgtgcaagtcttctttgctggccagaagggc
aagacttcagtgcagaaaagcagctacgagccactgtggaatgagcaggttgtctttaca
gacctgttccccccgctctgcaagcgcgtgaaagtgcagatccgggactccgacaaggtc
aacgacgtggccatcggcacccacttcattgacctgcgcaagatttccaacgatggagac
aaaggattcctgcccacgctgggcccggcctgggtgaacatgtacggttccacacgcaac
tacacgctgctggacgagcaccaggacctgaacgagggcctgggtgagggcgtgtcgttc
cgtgcccgcctcatgctgggcctggccgtggagatcctggacacgtccaaccccgagctc
accagctccaccgaggtgcaggtggagccggccacacccgtctcggagagctgcacaggg
aaaatggaagaattctttctatttggagccttcctagaggcctcaatgatcgatcggaaa
aatggagacaagccaatcacctttgaggtcaccataggtaactatgggaacgaagtggat
ggcctgtcacggccccagcggcctcggcctcggaaggagcctggggacgaggaagaagtc
gatctgatccagaactcaagtgaggacgaagccgatgagggtggggacctggcctccgtg
tcctccaccccacccatgaggccccagatcacggacaggaactactttcatctgccctac
ctggatcgcaagccctgcatctacatcaagagttggtggctggaccagcgccgccgcctc
tacaatgccaacattatggaccacatcgccgacaagctggaagaaggcctaaatgacgtg
caggaaatgatcaagacggagaagtcctaccccgagcgtcgcctgcggggcgtcctagag
gagctcagctgtggctgctaccgcttcctgtccctcgctgacaaggaccagggccacgca
tcccgcaccaggctggaccgggagcgcctcaagtcctgcctgcgggagctggagagcatg
ggacagcaggccaagaccctgcgggcacaggtgaagaaacacacagtgcgagacaagctg
aggctttgccagaatttcctgcagcagctgcgcttcctggcagacgagccccagcacagc
gtccccgacgtcttcatctggatgctgagcaacaataagcgtgtcgcctacgcccgggtg
ccctccaaggacctgctcttctccgccgttgagcaggagctgggcaaggactgcgccaag
gtcaagacgctcttcctcaagctgccgggcaagcggggcttcggctcagcaggctggacg
gtacaggccaagctggagctctacctgtggctgggcctcagcaagcatcgcaaggacttc
ctgtgcggcctgccctgcggcttcgaggaggtcaaggcagcccagggcctgggcctacac
tccttcccacccatcagcctggtctacaccaagaagcaggccttccagctccgagcccac
atgtaccaggctcgcagcctctttgctgccgacagcagtggcctctcggaccccttcgcc
cgcgtcttcttcatcaaccagagtcaatgcacagaggtactgaatgagaccctgtgcccc
acctgggaccagatgctggtgttcgacaacctggagctgtacggtgaagcccatgagttg
cgggatgacccccccatcattgtcatcgagatctacgaccaggacaccatgggcaaaacc
gacttcatgggccggaccttcgccaagccgctggtgaagatggccgacgaggcgtactgc
ccgccccgcttcccaccacagctcgagtacttccagatctaccgtggcgcggccacggcc
ggggacctgctggctgcctttgaactgctgcagattgggccagcggggaaggcggacctg
ccacccatcagtggccctgtggacatggaccgaggtcccatcatgcctgtgcccgtgggc
atccggcccgtgctcagcaaataccgaatcgaggtgctgttctggggcctgcgagacctg
aagcgggtgaacctggcccaggtggaccggccgcgggtagacatcgagtgtgcagggaag
ggggtgcagtcgtccctgatccacaattacaagaagaaccccaacttcagcaccctcgtc
aagtggtttgaagtggaccttccagagaacgagctgttgcacccgcccctgaacatccgg
gtggtggactgccgggccttcggccgctacacgctggtgggctcccatgctgtcagctct
ctgcggcgtttcatctacaggcccccagaccgctcggcccccagccggaacaccgtggtc
aggctcctccgggatggccgcgtgctgtgctacaggggcccctcctctcaccccgcaggg
gaggtggtggtgaacatggagctggaggcgcccgtcaagaagctggagacggtggtgaag
ctgggcgcgacttctgatgccgtcatcaaggtggatgtggctgatgaggagaaggagaag
aataagaagaagaagaaaaagggcagctcagaagagccagaagaggagccggatgagagc
atgctggactggtggtccaagtacttcgcctccattgataccatgaaggagcaacttcga
cagcaagagacctcaggcactgacttggaggagaaggaggaggtggacaacactgagggc
ctgaaggggcagatgaagggcaaggagaaggcaaaggccggaaaggaagagaagaagaag
agaacccagagccccggcaccggccagggctctgaggcccctgagaagaagaaacccaag
attgatgagctcaaggtgtaccccaaggaactggagtccgaatttgacaacttcgaggac
tggctgcacactttcaacttgctgcggggcaagacaggagatgacgaggacggctgcact
gaggaggagcgcatcgtgggccggttcaagggctccctctgcatgtacaaagtgccactc
ccagaggacgtgtcccgggaagctggctacgaccccacctacggcatgttccagggcatc
cccagcaatgaccccatcaatgtgctggtccgagtctatgtggtcagggccacagacctg
cacccagcagacatcaatggcaaagccgacccctacatcgccatccggctgggcaagaca
gacatccgagacaaggagaactacatctccaagcagctcaaccctgtcttcgggaagtcc
tttgacattgaggcctcattccccatggaatccatgctgacggtggccgtgtacgactgg
gatctggtaggcaccgacgacctcattggggaaaccaagatcgacctggagaaccgcttc
tacagcaagcaccgtgccacctgcggcatcgcccagacctactccctacatggctacaat
atctggcgggaccccatgaagcccagccagattctgacccgcctctgcaaggaaggcaag
gtggacggcccccactttgggccccccgggagagtgaaggtgtccaaccatgtcttcact
gggccttctgagatcgaggatgagaatggtcagaggaagcccacagaagagcacgtggca
ctgtgtgccctgaggcactgggaggacatgccccgcgtgggctgccgcctggtgcccgaa
cacgtggagactcggccgctgctcaaccccgacaagccgggcatcgagcagggccgcctg
gagctgtgggtggatatgttccccatggacatgccggccccggggacgcctctggacatc
tccccccggaagcccaagaagtacgagctccgggtcatcgtgtggaacacggacgaggtg
gtcctggaggacgatgacttcttcactggggagaagtccagcgacatttttgtgcggggg
tggctgaagggccagcaggaggacaagcaggacacagatgtccactatcactccctcacc
ggtgagggcaacttcaactggcgctacctgtttcccttcgactacctggccgctgaggaa
aagattgtcatctccaagaaggagtccatgttctcctgggacgagacggagtacaagatc
ccggcacggctcaccctgcagatctgggacgctgaccacttctccgcggacgacttcctg
ggggccatcgagctggacctgaaccggtttccccggggcgccaagacagccaagcagtgc
accatggagatggccctgggcgaggtggatgtgcccctggtttccatcttcaagcagaag
cgcgtcaaaggctggtggcccctcctggcccgcaatgagaatgatgagttcgagctcacg
ggcaaagtggaggcggagttgcatctcctgacagccgaggaggcggagaagaatcctgta
ggcctggcccgcaatgaacccgaccccctagagaaacccaaccggccggacaccgccttt
gtctggttcctcaaccccctcaagtccatcaagtacctggtctgcacgcgctacaagtgg
ctcattgtcaaggtcgtgctggcgctgctggggctgctgctgctggccctcttcctctac
agcctgcccggctacacggtcaagaagctcctcggggcctga
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