Ailuropoda melanoleuca (giant panda): 100482379
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Entry
100482379 CDS
T01329
Symbol
RAPGEF6
Name
(RefSeq) rap guanine nucleotide exchange factor 6 isoform X3
KO
K08020
Rap guanine nucleotide exchange factor 6
Organism
aml
Ailuropoda melanoleuca (giant panda)
Pathway
aml04015
Rap1 signaling pathway
aml04517
IgSF CAM signaling
aml04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
aml00001
]
09130 Environmental Information Processing
09132 Signal transduction
04015 Rap1 signaling pathway
100482379 (RAPGEF6)
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
100482379 (RAPGEF6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
100482379 (RAPGEF6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RasGEF
RA
PDZ
RasGEF_N
cNMP_binding
PDZ_6
RA_2
PDZ_2
Tcp10_C
Motif
Other DBs
NCBI-GeneID:
100482379
NCBI-ProteinID:
XP_019663025
Ensembl:
ENSAMEG00000017779
UniProt:
G1MHI5
LinkDB
All DBs
Position
3:complement(20587550..20790204)
Genome browser
AA seq
1614 aa
AA seq
DB search
MNSPVDPGARQALKKKPPERTPEDLNTIYSYLHGMEILSNLREHQLRLMSARARYERYSG
NQILFCSETVARCWYILLSGSVLMKDSMVLPPCSFGKQFGGKRGCDCLVLEPSEMIVVEN
SKDNEDSILQREIPARQSRRRFRKINYKGERQTITDDVDISSYLSLPADLTKMHITDNPH
PQVTHVSSSQSGCSIASDSGSSSLSDIYQATESEVGDVDLTRLPEGPVDSEDEEEEDEEI
DRTDPLQGRDLVRECLEKEPADKTDDDIEQLLEFMHQLPAFANMTMSVRRELCSVMIFEV
VEQAGAIILEDGQELDSWYVILNGTVEITHPDGKVENLFMGNSFGITPTLDKQYMHGVIR
TKVDDCQFVCIAQQDYWRILNHVEKNTHKVEEEGEIVMVHEHRELDRSGTRKGHIVIKAT
PERLIMHLIEEHSIVDPTYIEDFLLTYRTFLQSPLDVGIKLLEWFKIDSLRDKVTRIVLL
WVNNHFNDFEGDPAMTRFLEEFEKNLEDTKMNGHLRLLNIACAAKAKWRQVVLQKASRES
PLHFSLNGGSEKGFGIFVEGVEPSSKAADAGLKRGDQIMEVNGQNFENITFVKALEILRN
NTHLALTVKTNIFVFKELLSRTEQEKSGIPHIPKIAEKKSNRHSIQDVPGDIEHTSQEKG
NKKIKANTVSGGRNKIRKILDKTRFSILPPKLFSDGGLSQSQDDSIVGTRHCRHSLAIMP
IPGTLSSSSPDLLQPTTSMLDFSNPSDIPDQVIRVFKADQQSCYIIISKDTTAKEVVCHA
VHEFGLTGASDTYSLCEVSVTPEGVIKQRRLPDQFSKLADRIQLNGRYYLKNNMETETLC
SDEDAQELVKESQLSMLQLSTIEVATQLSMRDFDLFRNIEPTEYIDDLFKLDSKTGNTHL
KEFEDIVNQETFWVASEILTESNQLKRMKIIKHFIKIALHCRECKNFNSMFAIISGLNLA
SVARLRGTWEKLPSKYEKHLQDLQDLFDPSRNMAKYRNILSSQSMQPPIIPLFPVVKKDM
TFLHEGNDSKVDGLVNFEKLRMIAKEIRQVVRMTSANMDPAMMFRQRKKRWRSLGSLSQG
STNSNMLDVQGGAHKKRARRSSLLNAKKLYEDAQMARKVKQYLSSLDVDTDEEKFQMMSL
QWEPAYGTLTKNLSEKRSAKSSEMSPVPMRSAGQTAKAHLHQPHRVSQVLQVPAVNLHPI
RKKGQAKDPATLSTNLPQKVLGTTEEISGKKPPEDTISVASSLHSSPPASPQGSPRKGYT
LTPSAKSDNLSDSSHSEISSRSSIVSNCSVDSMSTALQDERCSSQAVVVPESTGLLEKTE
HSSGIGDHTHLGPGWTLSKPSLVKSLAVSSSMSNEEISHEHVILEAADSGRGSWTSCSSS
SHDNFQSLPNPKGWDFLNSYRHTHLDGPIVEVEPPDCEPYSCPKGCSRTCGQCKGNLETN
QLRQSWASSSSLSDTYEPNYGTVKRRVLESITPEPSEGLDPKDGTDPVYKTVTSSTDKGL
IVYCVTSPKKEDRYREPPPTPPGYMGISLADLKEGPHLHLKPPDYSVAVQRSKMMHDSLS
RLPPASLGSSPVACVPSKIVTQPQRHILQPSHPKLADVTDADSEADENEQVSAV
NT seq
4845 nt
NT seq
+upstream
nt +downstream
nt
atgaactcacccgtggaccccggcgctaggcaggcgctgaagaagaagcctcccgagcgg
acccccgaggatttaaatactatttattcttatcttcatggaatggaaatactatcaaat
ctcagggaacatcagcttagattaatgtctgcaagagctcgctatgagagatacagtggc
aatcagattcttttttgttcagaaactgttgccagatgttggtatatcctgctttctgga
tctgtgcttatgaaagactccatggtcttgcctccttgcagttttggtaagcagtttgga
ggaaaaagaggatgtgattgtcttgtattagagccttcagaaatgattgtggtagagaat
tccaaagataatgaagatagtattctacaaagagaaattcctgccagacagtctcgacga
agatttcggaaaattaattataaaggagagcgccagactattaccgatgatgtggacatt
agcagctatctttctcttccggccgatcttaccaagatgcacatcacagacaaccctcat
ccacaggtgactcatgtgtcttctagtcagtccggttgtagcatcgccagtgactctggg
agcagcagtttatctgatatctatcaggctacggaaagtgaggtaggagatgtagattta
acacgtcttccagaaggacctgttgattctgaagatgaagaagaggaagatgaagagatt
gatcgaacagatccactacaggggcgagatcttgttcgagaatgtctcgagaaagaacct
gcagacaaaactgatgatgacattgaacaattactggagtttatgcaccagctccctgct
tttgcaaacatgaccatgtctgtaaggagagaactctgctcagtgatgatttttgaagtg
gtcgagcaggctggagctattattcttgaagatgggcaagagcttgactcatggtatgtt
attttaaacggcactgtagaaatcactcatccagatggaaaagttgaaaatctctttatg
ggaaatagttttggaattactcccactctggataagcagtacatgcatggagttattaga
actaaagtagatgattgtcagtttgtctgcatagcccagcaggattattggagaatttta
aatcatgtggagaaaaatacccataaagttgaggaagagggagaaattgttatggtgcat
gagcaccgtgaactagatcggagtggaaccaggaaaggacacattgtaatcaaggcaaca
cctgagcgtctcatcatgcatttaatagaagaacattccattgtcgacccaacttatata
gaagatttcctactaacttacaggacatttcttcaaagtcctttggatgttgggatcaaa
ctgttggaatggtttaaaattgacagcttaagggataaggtaacacggattgtgttattg
tgggtaaataatcattttaatgattttgaaggtgatcctgctatgactcgatttctggag
gaatttgaaaaaaacctggaagatacaaaaatgaatggtcatctccgcttattgaatatt
gcctgtgctgcaaaggccaaatggagacaggtggtgctgcaaaaggcttcccgagagtcc
cctctgcatttcagccttaatggagggagtgagaaggggtttggtatttttgttgaagga
gtagaacctagtagcaaagctgctgatgccggactgaaacgtggtgatcagataatggaa
gtaaacggacaaaactttgagaatattacatttgtgaaggcccttgaaattttaaggaat
aatacgcatcttgcacttaccgtgaagaccaacatttttgtgttcaaagagttacttagt
aggactgaacaagaaaaatctggtattcctcatattcctaaaattgccgaaaaaaaaagt
aatcgccattcaatccaagatgtaccaggagatattgaacacacgtcacaggagaaagga
aataagaaaataaaagcaaacactgtttcaggtggaagaaacaaaatcaggaaaattttg
gataaaacacggtttagtatcttacctccaaaactgtttagtgacggaggcctgagccaa
tcacaagacgacagcattgtgggaacgagacactgcaggcacagtctggctataatgcct
attcctggaacactctcatccagcagccctgatctccttcagcctaccaccagcatgttg
gatttttctaatccttcagatattcctgatcaagttatacgagttttcaaagcagatcaa
caaagttgctacattatcattagtaaagacactacagctaaagaagttgtttgtcatgct
gttcatgaatttggtttgactggtgcgtctgacacatactctctctgtgaagtttctgtt
actcctgaaggtgtcataaaacagagaagacttccggaccagttctccaaattagctgat
agaattcagctcaatggaaggtattatttaaaaaataacatggaaacagaaaccttatgt
tcagatgaggatgcccaagaactagttaaggagagccaactgtccatgctgcagctcagt
accattgaggtggccactcagctgtcaatgagggactttgatttgtttcgtaatattgag
cctactgaatacattgatgacctttttaagttagattccaaaacaggaaatactcacttg
aaagagtttgaggacattgttaaccaggagacattctgggttgcctcagagattttaact
gaatcaaatcagctgaaacgaatgaagattattaagcattttattaaaattgcacttcat
tgtcgagaatgtaagaacttcaattccatgtttgcaataataagtggcttgaacctggca
tctgtagcacgactcagaggtacttgggagaaattaccaagcaagtatgagaaacacctc
caagatctacaagacctttttgatccatctagaaacatggcaaaatatagaaatattctt
agtagtcaaagcatgcagcctccaattattcctctcttccctgttgtcaagaaagatatg
acatttctgcatgaaggaaatgactccaaagtagatggattagtgaattttgagaagcta
agaatgattgccaaggaaatccggcaagttgttcgaatgacttctgctaacatggaccca
gcgatgatgtttcgacagaggaagaagaggtggcggagtctggggtcactgagtcaaggc
agtacaaactcgaacatgctggatgttcaaggaggtgcacacaaaaaaagggcgcgtcgc
agctctctacttaatgccaagaagctgtacgaggatgcccaaatggcaagaaaagttaag
cagtatctttccagtctggatgtagacacagatgaggaaaagtttcagatgatgtcatta
cagtgggaacctgcctatgggaccttgaccaagaatttaagtgagaaaagatcagccaaa
tcatcagaaatgtctccagtgcctatgagatcggcaggccaaacagctaaagcacatttg
catcagccccacagagtaagccaggtgctccaagtgccagctgttaatttgcaccccatc
aggaagaaaggacaagccaaagaccctgccacattaagtacaaatttacctcagaaagtt
ttagggacaactgaagaaataagtggtaagaaacctccagaagatactatctctgtggca
tcatccttacactctagtcctcctgcatctcctcaaggttcccctcgcaaaggttataca
cttacaccatcagctaaatctgacaacttgtctgactccagccatagtgaaatttcttca
cgatccagcattgtgagcaattgttctgttgactccatgtctacagctctgcaggatgaa
cggtgttcttcacaggctgtggtggtccctgaatccactgggcttttggaaaaaacagaa
cactcctcagggataggagaccacactcaccttggccctgggtggacgctgtcaaagcca
tctctcgttaagagtttagctgtctcctcttctatgagtaatgaagagatttctcatgag
cacgtcattttagaagcagcggatagtggtcgtggaagttggacttcctgttcaagcagc
tcccatgacaacttccaaagccttccaaacccaaaaggctgggattttttgaactcttat
cgacatacccatttggatggtcccattgttgaagtcgaaccccctgactgtgagccctat
tcctgccctaaaggctgctctagaacttgtggtcagtgtaaaggaaacctagagactaat
cagttgagacagagttgggcctcctccagttctctgtctgacacatatgaaccaaactat
gggacagttaaacggagagtgttggagagcatcacacctgagccctctgaaggcttggac
cccaaggatggcactgacccagtttacaaaactgttacttcaagtacagacaagggcttg
attgtgtactgtgtcacctcacccaagaaggaggataggtatagggagccacctcccact
cctccaggatacatggggatttctttagcggacctaaaggaaggaccccacctacaccta
aaacctccagattatagtgtggcagtgcagaggtcaaagatgatgcatgacagcctctct
agactgccaccagcttctctcggtagcagccccgtggcctgtgttccatcgaagattgta
actcagcctcagaggcatattttgcagccatcccatcctaaactagcagatgtgactgat
gcagatagcgaagcagatgaaaatgaacaggtctcagcagtgtag
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integrated database retrieval system
